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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB20058 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32928195 32928195 PRJEB20058_P_NODE_217809_length_244_cov_1.398907_g214985_i0 PRJEB20058 217809 244 1.398907 3.41333308 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 43.9 0.0138   NR RKY73789.1 2053570 g214985 i0 36.5 0.774590163934426 63 33 77.5 1 51 239 22 77 RKY73789.1 MAG: radical SAM protein [Candidatus Latescibacterota bacterium] diamond 189 43.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32957314 32957314 PRJEB20058_P_NODE_226706_length_236_cov_2.520000_g223881_i0 PRJEB20058 226706 236 2.52 5.9472 Pseudomonadati 3379134 Bacteria Bacteria 137 3.37e-36   NR MCI0452299.1 2053570 g223881 i0 86.1 2.74576271186441 72 10 91.5 0 228 13 124 195 MCI0452299.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 648 138 0.992753623188406 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32996262 32996262 PRJEB20058_P_NODE_17315_length_994_cov_1.862808_g15357_i0 PRJEB20058 17315 994 1.862808 18.51631152 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 207 2.19e-57   NR MCI0452348.1 2053570 g15357 i0 70.7 0.45271629778672 150 43 45 1 543 989 3 152 MCI0452348.1 S8 family serine peptidase [Candidatus Latescibacterota bacterium] diamond 450 207 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
33013753 33013753 PRJEB20058_P_NODE_32580_length_735_cov_1.655786_g30050_i0 PRJEB20058 32580 735 1.655786 12.1700271 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 90.5 1.31e-16   NR MFH1005911.1 2053570 g30050 i0 53.1 2.09795918367347 81 36 32.2 1 13 249 1013 1093 MFH1005911.1 family 78 glycoside hydrolase catalytic domain [Candidatus Latescibacterota bacterium] diamond 1542 90.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
33081630 33081630 PRJEB20058_P_NODE_188902_length_266_cov_4.034146_g186078_i0 PRJEB20058 188902 266 4.034146 10.73082836 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 51.2 5.02e-5   NR MBN1293572.1 2053570 g186078 i0 54.8 1.38721804511278 42 19 47.4 0 263 138 69 110 MBN1293572.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 369 51.2 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
33161688 33161688 PRJEB20058_P_NODE_100448_length_406_cov_4.460870_g97641_i0 PRJEB20058 100448 406 4.46087 18.1111322 Pseudomonadati 3379134 Bacteria Bacteria 81.3 2.82e-15   NR OQB34950.1 1852850 g97641 i0 58.2 0.990147783251232 67 28 49.5 0 389 189 80 146 OQB34950.1 MAG: hypothetical protein BWY06_03303 [Candidatus Latescibacteria bacterium ADurb.Bin168] diamond 402 81.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacteria bacterium ADurb.Bin168

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;