RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJEB20058 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25786307 25786307 PRJEB20058_P_NODE_133355_length_340_cov_2.232975_g130535_i0 PRJEB20058 133355 340 2.232975 7.592115 Bacillati 1783272 Bacteria Bacteria 171 5.63e-50   NR HSP99682.1 2052315 g130535 i0 74.3 3.98823529411765 113 29 99.7 0 2 340 26 138 HSP99682.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 1356 171 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
26064904 26064904 PRJEB20058_P_NODE_56213_length_560_cov_3.637275_g53462_i0 PRJEB20058 56213 560 3.637275 20.36874 Bacillati 1783272 Bacteria Bacteria 197 1.9999999999999996e-57   NR HYM52265.1 2052315 g53462 i0 65.1 5.41071428571429 146 51 78.2 0 123 560 5 150 HYM52265.1 protein kinase [Candidatus Dormiibacterota bacterium] diamond 3030 197 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
33076542 33076542 PRJEB20058_P_NODE_211853_length_248_cov_1.363636_g209029_i0 PRJEB20058 211853 248 1.363636 3.38181728 Bacillati 1783272 Bacteria Bacteria 99.4 7.6e-25   NR HEY8673719.1 2052315 g209029 i0 63.6 1.86290322580645 77 28 93.1 0 243 13 1 77 HEY8673719.1 PRC-barrel domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 462 99.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
33149894 33149894 PRJEB20058_P_NODE_189424_length_266_cov_1.136585_g186600_i0 PRJEB20058 189424 266 1.136585 3.0233161 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 42 0.0138   NR MDQ6855465.1 2052315 g186600 i0 35.7 0.631578947368421 56 33 63.2 1 1 168 12 64 MDQ6855465.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 168 42 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
33161913 33161913 PRJEB20058_P_NODE_44144_length_633_cov_2.092657_g41467_i0 PRJEB20058 44144 633 2.092657 13.24651881 Bacteria 2 Bacteria Bacteria 137 6.3e-34   NR HYL70647.1 2052315 g41467 i0 66.3 2.78199052132701 98 33 46.4 0 12 305 469 566 HYL70647.1 amidohydrolase [Candidatus Dormiibacterota bacterium] diamond 1761 138 0.992753623188406 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;