RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB20058" and tax_phylum = "Candidatus Adleribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32922811 32922811 PRJEB20058_P_NODE_182169_length_273_cov_10.872642_g179346_i0 PRJEB20058 182169 273 10.872642 29.68231266 Bacteria 2 Bacteria Bacteria 84 1.48e-16   NR OGC80383.1 1797243 g179346 i0 90.9 3.86813186813187 44 4 48.4 0 142 273 175 218 OGC80383.1 MAG: hypothetical protein A2943_01285 [Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_51_16] diamond 1056 84 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_51_16
33042502 33042502 PRJEB20058_P_NODE_28876_length_780_cov_5.169680_g26454_i0 PRJEB20058 28876 780 5.16968 40.323504 Bacteria 2 Bacteria Bacteria 423 4.8699999999999984e-144   NR MDP4020537.1 1932010 g26454 i0 80.5 3.78846153846154 246 48 94.6 0 4 741 113 358 MDP4020537.1 lysine--tRNA ligase [Candidatus Adlerbacteria bacterium] diamond 2955 423 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;