RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB15333" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJEB15333 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27412629 27412629 PRJEB15333_P_NODE_1743_length_452_cov_8.801489_g1662_i0 PRJEB15333 1743 452 8.801489 39.78273028 African cichlid piscichuvirus 3065075 Viruses Viruses 89.7 1.55e-17   NR WLN26256.1 3065075 g1662 i0 54.2 0.550884955752212 83 38 55.1 0 252 4 229 311 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 249 89.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
27665179 27665179 PRJEB15333_P_NODE_15184_length_177_cov_2.328125_g15100_i0 PRJEB15333 15184 177 2.328125 4.12078125 Microbacterium phage Endor 2944952 Viruses Viruses 40.4 0.0198   NR URC17906.1 2944952 g15100 i0 37.8 0.76271186440678 45 25 71.2 1 4 129 22 66 URC17906.1 hypothetical protein SEA_ENDOR_50 [Microbacterium phage Endor] diamond 135 40.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Ilzatvirus Microbacterium phage Endor
31929636 31929636 PRJEB15333_P_NODE_18617_length_166_cov_0.888889_g18533_i0 PRJEB15333 18617 166 0.888889 1.47555574 brine shrimp arlivirus 9 2900384 Viruses Viruses 114 6.019999999999999e-28   NR UNI74144.1 2900384 g18533 i0 98.2 0.993975903614458 55 1 99.4 0 165 1 442 496 UNI74144.1 MAG: RNA-dependent RNA polymerase [brine shrimp arlivirus 9] diamond 165 114 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;