RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB15333" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB15333 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30096216 30096216 PRJEB15333_P_NODE_15252_length_177_cov_1.320312_g15168_i0 PRJEB15333 15252 177 1.320312 2.33695224 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 52.8 4.39e-6   NR XP_057316643.1 13093 g15168 i0 52.5 0.677966101694915 40 19 67.8 0 134 15 10 49 XP_057316643.1 oocyte zinc finger protein XlCOF6-like isoform X2 [Hydractinia symbiolongicarpus] diamond 120 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
30412612 30412612 PRJEB15333_P_NODE_5293_length_283_cov_3.679487_g5209_i0 PRJEB15333 5293 283 3.679487 10.41294821 Porites lobata 104759 Cnidaria other_Eukaryota 47.4 0.00142   NR CAH3119332.1 104759 g5209 i0 50 2.1095406360424 30 14 31.8 1 188 99 1142 1170 CAH3119332.1 unnamed protein product [Porites lobata] diamond 597 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
32214507 32214507 PRJEB15333_P_NODE_14358_length_182_cov_1.233083_g14274_i0 PRJEB15333 14358 182 1.233083 2.24421106 Paramuricea clavata 317549 Cnidaria other_Eukaryota 49.3 8e-5   NR CAB3987183.1 317549 g14274 i0 44.1 0.972527472527473 59 33 97.3 0 5 181 388 446 CAB3987183.1 Hypothetical predicted protein [Paramuricea clavata] diamond 177 49.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;