RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB14803" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB14803 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27822977 27822977 PRJEB14803_P_NODE_13544_length_334_cov_2.538462_g13079_i0 PRJEB14803 13544 334 2.538462 8.47846308 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 46.6 0.00436   NR HEY8999635.1 2973664 g13079 i0 47.6 0.565868263473054 63 26 54.8 2 333 151 59 116 HEY8999635.1 molecular chaperone DnaJ [Candidatus Saccharimonadales bacterium] diamond 189 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30381038 30381038 PRJEB14803_P_NODE_18313_length_274_cov_2.209205_g17847_i0 PRJEB14803 18313 274 2.209205 6.0532217 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 74.3 3.78e-13   NR MDO8266121.1 2026720 g17847 i0 78.6 1.37956204379562 42 9 46 0 149 274 1 42 MDO8266121.1 argininosuccinate synthase [Candidatus Saccharibacteria bacterium] diamond 378 74.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;