RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB14803" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14803 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10224288 10224288 PRJEB14803_P_NODE_5249_length_606_cov_5.775832_g89_i8 PRJEB14803 5249 606 5.775832 35.00154192 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 63.5 7.88e-8   NR MCK5527334.1 2053570 g89 i8 31.1 1.96039603960396 132 84 65.3 3 206 601 280 404 MCK5527334.1 Ig-like domain-containing protein [Candidatus Latescibacterota bacterium] diamond 1188 63.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
27317785 27317785 PRJEB14803_P_NODE_6603_length_527_cov_2.319106_g6157_i0 PRJEB14803 6603 527 2.319106 12.22168862 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 146 6.36e-37   NR MBT3606101.1 2053570 g6157 i0 46.3 0.996204933586338 175 83 99.6 4 2 526 891 1054 MBT3606101.1 phosphoribosylformylglycinamidine synthase [Candidatus Latescibacterota bacterium] diamond 525 146 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28637565 28637565 PRJEB14803_P_NODE_31987_length_190_cov_1.548387_g31521_i0 PRJEB14803 31987 190 1.548387 2.9419353 Bacteria 2 Bacteria Bacteria 67.4 3.58e-11   NR UCE02132.1 2053570 g31521 i0 54.1 2.90526315789474 61 28 96.3 0 6 188 404 464 UCE02132.1 MAG: hypothetical protein JSW67_12890 [Candidatus Latescibacterota bacterium] diamond 552 67.4 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
31771464 31771464 PRJEB14803_P_NODE_42417_length_160_cov_1.152000_g41951_i0 PRJEB14803 42417 160 1.152 1.8432 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 42 0.0232   NR HOM56581.1 2053570 g41951 i0 42.3 2.925 52 30 97.5 0 2 157 663 714 HOM56581.1 fibronectin type III domain-containing protein [Candidatus Latescibacterota bacterium] diamond 468 42 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32151202 32151202 PRJEB14803_P_NODE_35018_length_180_cov_1.103448_g34552_i0 PRJEB14803 35018 180 1.103448 1.9862064 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 60.5 9.06e-9   NR UCE02019.1 2053570 g34552 i0 47.3 1.83333333333333 55 27 91.7 1 7 171 247 299 UCE02019.1 MAG: hypothetical protein JSW67_12250 [Candidatus Latescibacterota bacterium] diamond 330 60.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32681778 32681778 PRJEB14803_P_NODE_25700_length_219_cov_1.081522_g25234_i0 PRJEB14803 25700 219 1.081522 2.36853318 Bacteria 2 Bacteria Bacteria 75.9 5.95e-14   NR RPJ45095.1 2053570 g25234 i0 56.2 5.91780821917808 73 31 100 1 1 219 342 413 RPJ45095.1 MAG: hypothetical protein EHM19_05800 [Candidatus Latescibacterota bacterium] diamond 1296 76.3 0.99475753604194 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;