RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB14664" and tax_phylum = "Gemmatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29559222 29559222 PRJEB14664_P_NODE_15870_length_176_cov_1.191489_g15740_i0 PRJEB14664 15870 176 1.191489 2.09702064 Longimicrobiales bacterium 2910168 Bacteria Bacteria 62 3.51e-10   NR HEX6941005.1 2910168 g15740 i0 47.4 3.78409090909091 57 30 97.2 0 172 2 31 87 HEX6941005.1 Hsp20/alpha crystallin family protein [Longimicrobiales bacterium] diamond 666 62 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
30001614 30001614 PRJEB14664_P_NODE_12471_length_207_cov_1.627907_g12341_i0 PRJEB14664 12471 207 1.627907 3.36976749 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 55.5 7.36e-7   NR MEE8549818.1 2026742 g12341 i0 48.9 1.30434782608696 47 23 66.7 1 205 68 123 169 MEE8549818.1 DUF4215 domain-containing protein [Gemmatimonadota bacterium] diamond 270 55.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;