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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJEB14664" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJEB14664 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6399347 6399347 PRJEB14664_P_NODE_1866_length_676_cov_1.962559_g1759_i0 PRJEB14664 1866 676 1.962559 13.26689884 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 246 9.3e-80   NR MCB0370127.1 2053517 g1759 i0 87.9 0.625739644970414 141 17 62.6 0 456 34 30 170 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 423 246 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
7673494 7673494 PRJEB14664_P_NODE_5967_length_340_cov_1.196721_g5837_i0 PRJEB14664 5967 340 1.196721 4.0688514 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 189 2.6400000000000007e-59   NR MCB0369869.1 2053517 g5837 i0 81.3 0.988235294117647 112 21 98.8 0 336 1 1 112 MCB0369869.1 uL15 family ribosomal protein [Bdellovibrionales bacterium] diamond 336 189 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
8948291 8948291 PRJEB14664_P_NODE_9688_length_247_cov_1.759434_g9558_i0 PRJEB14664 9688 247 1.759434 4.34580198 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 103 4.68e-26   NR MCB0369389.1 2053517 g9558 i0 71 0.838056680161943 69 19 83.8 1 41 247 25 92 MCB0369389.1 hypothetical protein [Bdellovibrionales bacterium] diamond 207 103 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
26843402 26843402 PRJEB14664_P_NODE_9501_length_251_cov_1.291667_g9371_i0 PRJEB14664 9501 251 1.291667 3.24208417 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 116 3.829999999999999e-31   NR MCB0368309.1 2053517 g9371 i0 71.1 0.99203187250996006 83 24 99.2 0 3 251 17 99 MCB0368309.1 hypothetical protein [Bdellovibrionales bacterium] diamond 249 116 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28043794 28043794 PRJEB14664_P_NODE_11725_length_216_cov_2.038674_g11595_i0 PRJEB14664 11725 216 2.038674 4.40353584 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 94 1.48e-22   NR MCB0368309.1 2053517 g11595 i0 70.4 0.986111111111111 71 21 98.6 0 214 2 29 99 MCB0368309.1 hypothetical protein [Bdellovibrionales bacterium] diamond 213 94 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29464217 29464217 PRJEB14664_P_NODE_4670_length_400_cov_1.884932_g4540_i0 PRJEB14664 4670 400 1.884932 7.539728 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 223 1.6299999999999998e-72   NR MCB0369869.1 2053517 g4540 i0 84.1 0.99 132 21 99 0 397 2 1 132 MCB0369869.1 uL15 family ribosomal protein [Bdellovibrionales bacterium] diamond 396 223 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29622060 29622060 PRJEB14664_P_NODE_6090_length_335_cov_2.266667_g5960_i0 PRJEB14664 6090 335 2.266667 7.59333445 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 45.8 0.00914   NR MCB0348069.1 2053517 g5960 i0 48 0.447761194029851 50 23 44.8 1 153 302 409 455 MCB0348069.1 PKD domain-containing protein [Bdellovibrionales bacterium] diamond 150 45.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29780346 29780346 PRJEB14664_P_NODE_16691_length_170_cov_1.481481_g16561_i0 PRJEB14664 16691 170 1.481481 2.5185177 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 85.9 1.23e-19   NR MCB0370359.1 2053517 g16561 i0 80.9 0.829411764705882 47 9 82.9 0 30 170 18 64 MCB0370359.1 cation transporting ATPase C-terminal domain-containing protein [Bdellovibrionales bacterium] diamond 141 85.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29906835 29906835 PRJEB14664_P_NODE_15571_length_178_cov_1.958042_g15441_i0 PRJEB14664 15571 178 1.958042 3.48531476 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 97.4 4.319999999999999e-24   NR MCB0370715.1 2053517 g15441 i0 79.7 0.99438202247191 59 12 99.4 0 2 178 84 142 MCB0370715.1 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [Bdellovibrionales bacterium] diamond 177 97.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31518510 31518510 PRJEB14664_P_NODE_9976_length_242_cov_1.913043_g9846_i0 PRJEB14664 9976 242 1.913043 4.62956406 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 119 4.72e-32   NR MCB0369646.1 2053517 g9846 i0 66.7 1.07851239669421 87 22 99.2 1 240 1 10 96 MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] diamond 261 119 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31644769 31644769 PRJEB14664_P_NODE_9377_length_253_cov_1.467890_g9247_i0 PRJEB14664 9377 253 1.46789 3.7137617 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 143 3.07e-42   NR MCB0370921.1 2053517 g9247 i0 79.5 0.984189723320158 83 17 98.4 0 3 251 6 88 MCB0370921.1 hypothetical protein [Bdellovibrionales bacterium] diamond 249 143 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;