RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26321009 26321009 PRJEB14175_P_NODE_182735_length_242_cov_3.337017_g180468_i0 PRJEB14175 182735 242 3.337017 8.07558114 Olpidium bornovanus 278681 Fungi Fungi 144 4.62e-41   NR KAG5458586.1 278681 g180468 i0 88.8 1.98347107438017 80 9 99.2 0 240 1 115 194 KAG5458586.1 MAG: DHS-like NAD/FAD-binding domain-containing protein [Olpidium bornovanus] diamond 480 144 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
33132108 33132108 PRJEB14175_P_NODE_72231_length_433_cov_2.782258_g69972_i0 PRJEB14175 72231 433 2.782258 12.04717714 Olpidium bornovanus 278681 Fungi Fungi 100 2.84e-24   NR KAG5458609.1 278681 g69972 i0 74.1 0.561200923787529 81 21 56.1 0 376 134 1 81 KAG5458609.1 MAG: tropomyosin, partial [Olpidium bornovanus] diamond 243 100 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;