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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32922518 32922518 PRJEB14175_P_NODE_249441_length_203_cov_2.746479_g247173_i0 PRJEB14175 249441 203 2.746479 5.57535237 Opisthokonta 33154 Nematoda Nematoda 43.9 0.00769   NR TKR65468.1 34508 g247173 i0 37.5 2.03940886699507 48 29 70.9 1 9 152 188 234 TKR65468.1 hypothetical protein L596_025871 [Steinernema carpocapsae] diamond 414 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
32925498 32925498 PRJEB14175_P_NODE_128185_length_306_cov_15.538776_g125918_i0 PRJEB14175 128185 306 15.538776 47.54865456 Pristionchus pacificus 54126 Nematoda Nematoda 43.9 0.0301   NR KAF8361731.1 54126 g125918 i0 31.7 0.803921568627451 82 49 75.5 2 75 305 278 357 KAF8361731.1 hypothetical protein PRIPAC_88654, partial [Pristionchus pacificus] diamond 246 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
32939921 32939921 PRJEB14175_P_NODE_98993_length_360_cov_1.842809_g96727_i0 PRJEB14175 98993 360 1.842809 6.6341124 Rhabditida 6236 Nematoda Nematoda 62 2.34e-8   NR ETN82032.1 51031 g96727 i0 38.4 4.06666666666667 99 45 82.5 1 53 349 305 387 ETN82032.1 Gaa1-like, GPI transamidase component [Necator americanus] diamond 1464 62 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
32944589 32944589 PRJEB14175_P_NODE_96514_length_365_cov_14.608553_g94248_i0 PRJEB14175 96514 365 14.608553 53.32121845 Pristionchus fissidentatus 1538716 Nematoda Nematoda 73.2 1.67e-12   NR GMT20911.1 1538716 g94248 i0 64.7 2.12054794520548 51 18 41.9 0 344 192 245 295 GMT20911.1 hypothetical protein PFISCL1PPCAC_12208, partial [Pristionchus fissidentatus] diamond 774 73.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
32956743 32956743 PRJEB14175_P_NODE_132514_length_300_cov_3.368201_g130247_i0 PRJEB14175 132514 300 3.368201 10.104603 Rhabditida 6236 Nematoda Nematoda 56.6 9.42e-7   NR KAH7714618.1 70226 g130247 i0 34.5 3.5 87 50 83 3 25 273 317 400 KAH7714618.1 Protein CLEC-62 a [Aphelenchoides avenae] diamond 1050 56.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
32991091 32991091 PRJEB14175_P_NODE_209003_length_221_cov_3.206250_g206736_i0 PRJEB14175 209003 221 3.20625 7.0858125 Trichinella 6333 Nematoda Nematoda 60.5 1.58e-8   NR XP_003380888.1 6334 g206736 i0 55.1 4.00452488687783 49 22 66.5 0 3 149 762 810 XP_003380888.1 Sly1 protein-like protein [Trichinella spiralis] diamond 885 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
32994277 32994277 PRJEB14175_P_NODE_166507_length_258_cov_2.045685_g164240_i0 PRJEB14175 166507 258 2.045685 5.2778673 Mesorhabditis belari 2138241 Nematoda Nematoda 54.7 2.72e-6   NR CAJ0938908.1 2138241 g164240 i0 84.8 0.383720930232558 33 4 37.2 1 23 118 622 654 CAJ0938908.1 unnamed protein product, partial [Mesorhabditis belari] diamond 99 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
33007823 33007823 PRJEB14175_P_NODE_133787_length_298_cov_4.666667_g131520_i0 PRJEB14175 133787 298 4.666667 13.90666766 root 1 Root_unresolved Root_unresolved 77 6.27e-14   NR NP_503467.2 6239 g131520 i0 75.6 11.7785234899329 45 11 45.3 0 22 156 447 491 NP_503467.2 Aldehyde dehydrogenase domain-containing protein [Caenorhabditis elegans] diamond 3510 77 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
33007949 33007949 PRJEB14175_P_NODE_210195_length_220_cov_5.572327_g207928_i0 PRJEB14175 210195 220 5.572327 12.2591194 Caenorhabditis 6237 Nematoda Nematoda 67.8 3.36e-12   NR UMM29526.1 6238 g207928 i0 81.1 1.51363636363636 37 7 50.5 0 112 2 100 136 UMM29526.1 hypothetical protein L5515_011840 [Caenorhabditis briggsae] diamond 333 68.2 0.994134897360704 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
33025009 33025009 PRJEB14175_P_NODE_138548_length_291_cov_9.556522_g136281_i0 PRJEB14175 138548 291 9.556522 27.80947902 Metazoa 33208 Nematoda Nematoda 53.9 8.01e-6   NR OUC48404.1 6335 g136281 i0 35.7 5.29896907216495 84 51 86.6 2 258 7 720 800 OUC48404.1 hypothetical protein D917_06179 [Trichinella nativa] diamond 1542 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa
33028423 33028423 PRJEB14175_P_NODE_166668_length_258_cov_1.360406_g164401_i0 PRJEB14175 166668 258 1.360406 3.50984748 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 42.4 0.0452   NR CAD5205317.1 465554 g164401 i0 50 0.418604651162791 36 18 41.9 0 258 151 121 156 CAD5205317.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 108 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
33028775 33028775 PRJEB14175_P_NODE_203740_length_225_cov_3.371951_g201473_i0 PRJEB14175 203740 225 3.371951 7.58688975 Wuchereria bancrofti 6293 Nematoda Nematoda 95.5 9.96e-22   NR EJW77387.1 6293 g201473 i0 76 1 75 14 96 2 3 218 49 122 EJW77387.1 hypothetical protein WUBG_11700 [Wuchereria bancrofti] diamond 225 95.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
33029736 33029736 PRJEB14175_P_NODE_68468_length_446_cov_5.732468_g66210_i0 PRJEB14175 68468 446 5.732468 25.56680728 Diploscapter pachys 2018661 Nematoda Nematoda 180 4.7799999999999986e-55   NR PAV58449.1 2018661 g66210 i0 98.9 0.632286995515695 94 1 63.2 0 430 149 65 158 PAV58449.1 hypothetical protein WR25_12382 [Diploscapter pachys] diamond 282 180 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
33063737 33063737 PRJEB14175_P_NODE_67805_length_448_cov_21.914729_g65547_i0 PRJEB14175 67805 448 21.914729 98.17798592 Toxocara canis 6265 Nematoda Nematoda 45.4 0.0322   NR KHN84969.1 6265 g65547 i0 32.9 1.01785714285714 76 43 50.9 2 54 281 471 538 KHN84969.1 Histone acetyltransferase Tip60 [Toxocara canis] diamond 456 45.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
33113386 33113386 PRJEB14175_P_NODE_142343_length_286_cov_5.213333_g140076_i0 PRJEB14175 142343 286 5.213333 14.91013238 Diploscapter pachys 2018661 Nematoda Nematoda 60.5 3.37e-8   NR PAV70813.1 2018661 g140076 i0 46.5 0.744755244755245 71 33 72.4 3 229 23 3 70 PAV70813.1 hypothetical protein WR25_23028 [Diploscapter pachys] diamond 213 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
33115056 33115056 PRJEB14175_P_NODE_80967_length_405_cov_17.008721_g78705_i0 PRJEB14175 80967 405 17.008721 68.88532005 Auanema sp. JU1783 2878363 Nematoda Nematoda 66.2 7.34e-10   NR CAI4225152.1 2878363 g78705 i0 37.1 0.659259259259259 89 55 65.9 1 380 114 179 266 CAI4225152.1 unnamed protein product [Auanema sp. JU1783] diamond 267 66.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
33127339 33127339 PRJEB14175_P_NODE_176215_length_248_cov_4.962567_g173948_i0 PRJEB14175 176215 248 4.962567 12.30716616 Rhabditida 6236 Nematoda Nematoda 76.3 5.69e-14   NR KIH55343.1 51022 g173948 i0 73.1 3.10887096774194 52 14 62.9 0 1 156 382 433 KIH55343.1 D-family protein [Ancylostoma duodenale] diamond 771 77 0.990909090909091 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
33130788 33130788 PRJEB14175_P_NODE_165807_length_259_cov_1.000000_g163540_i0 PRJEB14175 165807 259 1 2.59 Necator americanus 51031 Nematoda Nematoda 97.4 9.4e-22   NR ETN73472.1 51031 g163540 i0 55.7 1.01930501930502 88 36 99.6 2 1 258 164 250 ETN73472.1 replication initiation factor, partial [Necator americanus] diamond 264 97.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
33131108 33131108 PRJEB14175_P_NODE_200879_length_227_cov_6.493976_g198612_i0 PRJEB14175 200879 227 6.493976 14.74132552 Ditylenchus destructor 166010 Nematoda Nematoda 41.6 0.0136   NR KAI1731006.1 166010 g198612 i0 43.2 0.581497797356828 44 20 51.5 1 161 45 6 49 KAI1731006.1 hypothetical protein Ddc_03729 [Ditylenchus destructor] diamond 132 41.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
33131620 33131620 PRJEB14175_P_NODE_260471_length_201_cov_0.914286_g258203_i0 PRJEB14175 260471 201 0.914286 1.83771486 Caenorhabditis elegans 6239 Nematoda Nematoda 100 6.5e-23   NR NP_506055.2 6239 g258203 i0 72.3 3.88059701492537 65 18 97 0 1 195 478 542 NP_506055.2 Elongator complex protein 3 [Caenorhabditis elegans] diamond 780 100 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
33161481 33161481 PRJEB14175_P_NODE_237752_length_206_cov_2.896552_g235484_i0 PRJEB14175 237752 206 2.896552 5.96689712 Metazoa 33208 Nematoda Nematoda 46.2 0.00137   NR UMM41932.1 6238 g235484 i0 67.6 2.8252427184466 37 10 51 1 26 130 601 637 UMM41932.1 hypothetical protein L5515_017967 [Caenorhabditis briggsae] diamond 582 46.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
33161653 33161653 PRJEB14175_P_NODE_83672_length_398_cov_1.848665_g81408_i0 PRJEB14175 83672 398 1.848665 7.3576867 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.7 0.0413   NR KAF8361780.1 54126 g81408 i0 46.7 1.57537688442211 45 18 29.4 1 1 117 87 131 KAF8361780.1 hypothetical protein PRIPAC_88703, partial [Pristionchus pacificus] diamond 627 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
33164290 33164290 PRJEB14175_P_NODE_115552_length_327_cov_7.312030_g113286_i0 PRJEB14175 115552 327 7.31203 23.9103381 Trichinella nativa 6335 Nematoda Nematoda 77 8.81e-14   NR KRZ47762.1 6335 g113286 i0 48.1 0.743119266055046 81 42 74.3 0 305 63 446 526 KRZ47762.1 hypothetical protein T02_15875 [Trichinella nativa] diamond 243 77 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;