RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Deferribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Deferribacterota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB14175 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26459703 26459703 PRJEB14175_P_NODE_238088_length_206_cov_1.765517_g235820_i0 PRJEB14175 238088 206 1.765517 3.63696502 Deferribacter desulfuricans 197162 Bacteria Bacteria 90.9 2.47e-19   NR WP_013007507.1 197162 g235820 i0 58.8 0.990291262135922 68 27 97.6 1 203 3 412 479 WP_013007507.1 indolepyruvate ferredoxin oxidoreductase subunit alpha [Deferribacter desulfuricans] diamond 204 90.9 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Deferribacteraceae Deferribacter Deferribacter desulfuricans
33164573 33164573 PRJEB14175_P_NODE_145384_length_282_cov_8.357466_g143117_i0 PRJEB14175 145384 282 8.357466 23.56805412 Deferribacteraceae bacterium 2053543 Bacteria Bacteria 70.5 2.02e-12   NR MDR0454360.1 2053543 g143117 i0 50.9 2.36170212765957 53 26 56.4 0 54 212 150 202 MDR0454360.1 carbonic anhydrase [Deferribacteraceae bacterium] diamond 666 70.5 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Deferribacteraceae   Deferribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;