RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32927226 32927226 PRJEB14175_P_NODE_71817_length_434_cov_10.718499_g69558_i0 PRJEB14175 71817 434 10.718499 46.51828566 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 105 3.32e-25   NR MES1914063.1 1215613 g69558 i0 78.7 1.28571428571429 61 13 42.2 0 411 229 126 186 MES1914063.1 Arf GTPase arf1 [Cercozoa sp. M6MM] diamond 558 105 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
33011051 33011051 PRJEB14175_P_NODE_136652_length_294_cov_3.244635_g134385_i0 PRJEB14175 136652 294 3.244635 9.5392269 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.21e-13   NR MES1916707.1 1215613 g134385 i0 43.1 0.73469387755102 72 40 72.4 1 47 259 179 250 MES1916707.1 hypothetical protein [Cercozoa sp. M6MM] diamond 216 74.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
33113154 33113154 PRJEB14175_P_NODE_118247_length_322_cov_34.080460_g115981_i0 PRJEB14175 118247 322 34.08046 109.7390812 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 62.8 8.06e-9   NR MES1915517.1 1215613 g115981 i0 50.8 0.549689440993789 59 29 55 0 23 199 265 323 MES1915517.1 hypothetical protein [Cercozoa sp. M6MM] diamond 177 62.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;