RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32959647 32959647 PRJEB14175_P_NODE_104546_length_348_cov_3.529617_g102280_i0 PRJEB14175 104546 348 3.529617 12.28306716 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 174 8.43e-49   NR HNY25768.1 2107588 g102280 i0 87.5 1.6551724137931 96 12 82.8 0 347 60 540 635 HNY25768.1 nucleoside-diphosphate sugar epimerase/dehydratase [Candidatus Sumerlaeota bacterium] diamond 576 174 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
32977624 32977624 PRJEB14175_P_NODE_194395_length_232_cov_18.087719_g192128_i0 PRJEB14175 194395 232 18.087719 41.96350808 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 42.7 0.032   NR AXA35187.1 2250252 g192128 i0 40 0.581896551724138 45 27 58.2 0 226 92 119 163 AXA35187.1 Glycosyltransferase [Candidatus Sumerlaea chitinivorans] diamond 135 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
33061956 33061956 PRJEB14175_P_NODE_113957_length_330_cov_3.208178_g111691_i0 PRJEB14175 113957 330 3.208178 10.5869874 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 148 4.61e-39   NR MBM3334065.1 2107588 g111691 i0 78.9 1.72727272727273 95 20 86.4 0 303 19 201 295 MBM3334065.1 polysaccharide biosynthesis protein [Candidatus Sumerlaeota bacterium] diamond 570 148 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
33063572 33063572 PRJEB14175_P_NODE_48013_length_538_cov_47.488470_g45785_i0 PRJEB14175 48013 538 47.48847 255.4879686 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 261 2.47e-84   NR AXA36918.1 2250252 g45785 i0 85.6 0.853159851301115 153 22 85.3 0 479 21 81 233 AXA36918.1 hypothetical protein BRCON_2141 [Candidatus Sumerlaea chitinivorans] diamond 459 261 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;