RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25882075 25882075 PRJEB14175_P_NODE_273283_length_184_cov_27.731707_g271015_i0 PRJEB14175 273283 184 27.731707 51.02634088 Bacteria 2 Bacteria Bacteria 80.1 5.91e-17   NR KKP23969.1 1618771 g271015 i0 97.5 10.4347826086957 40 1 65.2 0 27 146 138 177 KKP23969.1 MAG: 50S ribosomal protein L6 [Candidatus Nomurabacteria bacterium GW2011_GWF2_30_133] diamond 1920 80.9 0.990111248454882 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWF2_30_133
33075967 33075967 PRJEB14175_P_NODE_108213_length_341_cov_2.064286_g105947_i0 PRJEB14175 108213 341 2.064286 7.03921526 Bacillati 1783272 Bacteria Bacteria 60.5 6.91e-8   NR OGI64655.1 1801733 g105947 i0 51.8 1.4692082111437 56 27 49.3 0 316 149 521 576 OGI64655.1 MAG: molecular chaperone DnaK [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_39_10] diamond 501 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_39_10
33093445 33093445 PRJEB14175_P_NODE_244966_length_204_cov_23.720280_g242698_i0 PRJEB14175 244966 204 23.72028 48.3893712 Bacteria 2 Bacteria Bacteria 75.9 4.57e-14   NR HCC06132.1 2052152 g242698 i0 64.9 3.35294117647059 57 20 83.8 0 32 202 37 93 HCC06132.1 DNA primase [Candidatus Nomurabacteria bacterium] diamond 684 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;