RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32908661 32908661 PRJEB14175_P_NODE_156233_length_269_cov_4.408654_g153966_i0 PRJEB14175 156233 269 4.408654 11.85927926 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 48.5 4.69e-4   NR MBN2017840.1 2030808 g153966 i0 67.7 0.345724907063197 31 10 34.6 0 249 157 651 681 MBN2017840.1 tetratricopeptide repeat protein [Candidatus Cloacimonadota bacterium] diamond 93 48.5 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32978299 32978299 PRJEB14175_P_NODE_276875_length_175_cov_32.236842_g274607_i0 PRJEB14175 276875 175 32.236842 56.4144735 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 76.6 1.57e-14   NR MDD3501271.1 2030808 g274607 i0 97 0.565714285714286 33 1 56.6 0 3 101 451 483 MDD3501271.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 99 76.6 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
33062320 33062320 PRJEB14175_P_NODE_147157_length_280_cov_3.840183_g144890_i0 PRJEB14175 147157 280 3.840183 10.7525124 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 164 5.77e-46   NR MDD4310451.1 2030808 g144890 i0 83.9 1.76785714285714 87 14 93.2 0 20 280 413 499 MDD4310451.1 polysaccharide deacetylase family protein [Candidatus Cloacimonadota bacterium] diamond 495 164 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;