RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26562977 26562977 PRJEB14175_P_NODE_44672_length_558_cov_9.740443_g42453_i0 PRJEB14175 44672 558 9.740443 54.35167194 Fungi 4751 Fungi Fungi 283 5.6999999999999996e-95   NR KAJ3359571.1 64505 g42453 i0 86.1 42.4623655913978 166 23 89.2 0 12 509 11 176 KAJ3359571.1 40S ribosomal protein S9 [Allomyces javanicus] diamond 23694 285 0.992982456140351 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus
33012238 33012238 PRJEB14175_P_NODE_26212_length_722_cov_9.364599_g24197_i0 PRJEB14175 26212 722 9.364599 67.61240478 Paraphysoderma sedebokerense 1500003 Fungi Fungi 62 2.65e-8   NR KAI9144926.1 1500003 g24197 i0 63 0.191135734072022 46 15 18.3 1 654 523 3 48 KAI9144926.1 ribosomal protein L28 [Paraphysoderma sedebokerense] diamond 138 62 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
33097141 33097141 PRJEB14175_P_NODE_220342_length_213_cov_2.947368_g218074_i0 PRJEB14175 220342 213 2.947368 6.27789384 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 49.3 4.29e-5   NR KNE63357.1 578462 g218074 i0 48 2.11267605633803 50 26 70.4 0 205 56 89 138 KNE63357.1 hypothetical protein AMAG_08494 [Allomyces macrogynus ATCC 38327] diamond 450 49.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;