RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB14175" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJEB14175 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32922258 32922258 PRJEB14175_P_NODE_115545_length_327_cov_7.578947_g113279_i0 PRJEB14175 115545 327 7.578947 24.78315669 Viruses 10239 Viruses Viruses 89.7 4.22e-19   NR YP_009126890.1 1618257 g113279 i0 42.6 1.77981651376147 101 57 92.7 1 324 22 77 176 YP_009126890.1 replication-associated protein [Avon-Heathcote Estuary associated circular virus 6] diamond 582 90.5 0.991160220994475 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae   Avon-Heathcote Estuary associated circular virus 6
33147932 33147932 PRJEB14175_P_NODE_180528_length_244_cov_3.459016_g178261_i0 PRJEB14175 180528 244 3.459016 8.43999904 Turdus naumanni CRESS-DNA-virus sp. 2815063 Viruses Viruses 99.8 1.22e-22   NR QTE03581.1 2815063 g178261 i0 72.1 0.75 61 17 75 0 19 201 34 94 QTE03581.1 MAG: putative replication protein [Turdus naumanni CRESS-DNA-virus sp.] diamond 183 99.8 1 Viruses   Shotokuvirae Cressdnaviricota         Turdus naumanni CRESS-DNA-virus sp.
33166085 33166085 PRJEB14175_P_NODE_68112_length_447_cov_14.559585_g65854_i0 PRJEB14175 68112 447 14.559585 65.08134495 Genomoviridae sp. 2202565 Viruses Viruses 118 3.34e-28   NR DAI24652.1 2202565 g65854 i0 52.7 0.624161073825503 93 43 61.7 1 23 298 330 422 DAI24652.1 MAG TPA: Geminivirus Rep catalytic domain [Genomoviridae sp.] diamond 279 118 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;