RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB12982" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14049172 14049172 PRJEB12982_P_NODE_6392_length_290_cov_1.161826_g6229_i0 PRJEB12982 6392 290 1.161826 3.3692954 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 137 3.53e-39   NR EUD71171.1 138298 g6229 i0 69.9 6.65172413793103 93 26 96.2 1 12 290 1 91 EUD71171.1 eukaryotic translation initiation factor 5A-2 [Plasmodium vinckei petteri] diamond 1929 137 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
29622035 29622035 PRJEB12982_P_NODE_9090_length_236_cov_1.363636_g8927_i0 PRJEB12982 9090 236 1.363636 3.21818096 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 92 3.53e-21   NR XP_013233901.1 5802 g8927 i0 61.1 12.521186440678 72 28 91.5 0 218 3 90 161 XP_013233901.1 40S ribosomal protein S9, putative [Eimeria tenella] diamond 2955 92 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;