RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB12366" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12366 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29496142 29496142 PRJEB12366_P_NODE_16430_length_173_cov_1.449275_g16240_i0 PRJEB12366 16430 173 1.449275 2.50724575 Umbelopsis isabellina 91625 Fungi Fungi 44.7 0.0031   NR KAJ2958150.1 91625 g16240 i0 44.2 0.901734104046243 52 29 90.2 0 166 11 2686 2737 KAJ2958150.1 hypothetical protein NQZ79_g6237 [Umbelopsis isabellina] diamond 156 44.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis isabellina
29938334 29938334 PRJEB12366_P_NODE_10391_length_234_cov_1.190955_g10201_i0 PRJEB12366 10391 234 1.190955 2.7868347 Rhizopus delemar 936053 Fungi Fungi 101 1.5499999999999998e-24   NR KAG1461572.1 936053 g10201 i0 75.4 0.833333333333333 65 16 83.3 0 27 221 53 117 KAG1461572.1 hypothetical protein G6F56_005699 [Rhizopus delemar] diamond 195 101 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
30184618 30184618 PRJEB12366_P_NODE_4912_length_376_cov_2.674487_g4722_i0 PRJEB12366 4912 376 2.674487 10.05607112 Cunninghamellaceae 4851 Fungi Fungi 86.3 7.01e-18   NR KAI8075209.1 101105 g4722 i0 56.3 2.83244680851064 71 31 56.6 0 1 213 147 217 KAI8075209.1 GPR1/FUN34/yaaH family-domain-containing protein [Gongronella butleri] diamond 1065 86.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Gongronella Gongronella butleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;