RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB12366" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12366 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26709791 26709791 PRJEB12366_P_NODE_12181_length_211_cov_1.136364_g11991_i0 PRJEB12366 12181 211 1.136364 2.39772804 Fungi 4751 Fungi Fungi 48.5 2.23e-4   NR KAH7130356.1 256645 g11991 i0 38.8 4.81990521327014 67 41 95.3 0 8 208 328 394 KAH7130356.1 camp-dependent protein kinase A regulatory subunit [Dendryphion nanum] diamond 1017 48.5 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Torulaceae Dendryphion Dendryphion nanum
28896138 28896138 PRJEB12366_P_NODE_10968_length_226_cov_1.047120_g10778_i0 PRJEB12366 10968 226 1.04712 2.3664912 Friedmanniomyces endolithicus 329885 Fungi Fungi 65.1 2.01e-10   NR KAK0360406.1 329885 g10778 i0 90.6 0.424778761061947 32 3 42.5 0 225 130 222 253 KAK0360406.1 hypothetical protein LTR94_027428, partial [Friedmanniomyces endolithicus] diamond 96 65.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Friedmanniomyces Friedmanniomyces endolithicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;