RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB12366" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12366 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
985654 985654 PRJEB12366_P_NODE_16261_length_174_cov_1.726619_g16071_i0 PRJEB12366 16261 174 1.726619 3.00431706 Nesidiocoris tenuis 355587 Arthropoda Arthropoda 104 2.01e-24   NR CAB0008563.1 355587 g16071 i0 77.2 2.94827586206897 57 13 98.3 0 2 172 442 498 CAB0008563.1 unnamed protein product [Nesidiocoris tenuis] diamond 513 104 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Miridae Nesidiocoris Nesidiocoris tenuis
1295024 1295024 PRJEB12366_P_NODE_9362_length_250_cov_2.037209_g9172_i0 PRJEB12366 9362 250 2.037209 5.0930225 Metazoa 33208 Arthropoda Arthropoda 116 1.1e-29   NR KAL1395800.1 38569 g9172 i0 64.6 2.748 82 29 98.4 0 5 250 106 187 KAL1395800.1 hypothetical protein pipiens_002792 [Culex pipiens pipiens] diamond 687 116 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Culex Culex pipiens
6398856 6398856 PRJEB12366_P_NODE_11886_length_214_cov_1.089385_g11696_i0 PRJEB12366 11886 214 1.089385 2.3312839 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 159 3.63e-43   NR KAG0415946.1 34615 g11696 i0 93 151.289719626168 71 5 99.5 0 2 214 660 730 KAG0415946.1 hypothetical protein HPB47_006888 [Ixodes persulcatus] diamond 32376 160 0.99375 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Ixodida Ixodidae Ixodes Ixodes persulcatus
19146243 19146243 PRJEB12366_P_NODE_12876_length_203_cov_1.422619_g12686_i0 PRJEB12366 12876 203 1.422619 2.88791657 Metazoa 33208 Arthropoda Arthropoda 139 2.51e-39   NR XP_023230065.1 218467 g12686 i0 98.5 157.433497536946 67 1 99 0 2 202 9 75 XP_023230065.1 serine/threonine-protein phosphatase 4 catalytic subunit B-like [Centruroides sculpturatus] diamond 31959 139 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Scorpiones Buthidae Centruroides Centruroides sculpturatus
25211730 25211730 PRJEB12366_P_NODE_8780_length_261_cov_1.769912_g8590_i0 PRJEB12366 8780 261 1.769912 4.61947032 Metazoa 33208 Arthropoda Arthropoda 56.6 5.72e-7   NR KAJ4432063.1 6978 g8590 i0 100 28.1379310344828 24 0 27.6 0 3 74 394 417 KAJ4432063.1 hypothetical protein ANN_20677 [Periplaneta americana] diamond 7344 56.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Blattodea Blattidae Periplaneta Periplaneta americana
27190953 27190953 PRJEB12366_P_NODE_8742_length_262_cov_1.233480_g8552_i0 PRJEB12366 8742 262 1.23348 3.2317176 Armadillidium nasatum 96803 Arthropoda Arthropoda 67.8 7.05e-11   NR KAB7503555.1 96803 g8552 i0 67.5 1.9236641221374 83 27 95 0 250 2 342 424 KAB7503555.1 F-box/LRR-repeat protein 20, partial [Armadillidium nasatum] diamond 504 67.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Isopoda Armadillidiidae Armadillidium Armadillidium nasatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;