RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB12296" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12296 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32908012 32908012 PRJEB12296_S_NODE_10425_length_171_cov_4.036765_g10393_i0 PRJEB12296 10425 171 4.036765 6.90286815 Nephila pilipes 299642 Arthropoda Arthropoda 55.5 7.8e-8   NR GFT29937.1 299642 g10393 i0 81.8 2.52631578947368 33 6 57.9 0 5 103 101 133 GFT29937.1 60S ribosomal protein L35a [Nephila pilipes] diamond 432 55.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Nephila Nephila pilipes
33044764 33044764 PRJEB12296_S_NODE_6525_length_194_cov_2.012579_g6493_i0 PRJEB12296 6525 194 2.012579 3.90440326 Idotea baltica 82763 Arthropoda Arthropoda 93.6 1.41e-21   NR MCL4112850.1 82763 g6493 i0 79.2 1.59278350515464 53 11 82 0 1 159 184 236 MCL4112850.1 hypothetical protein [Idotea baltica] diamond 309 93.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Isopoda Idoteidae Idotea Idotea baltica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;