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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJEB12237" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJEB12237 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20703 20703 PRJEB12237_P_NODE_5741_length_247_cov_1.320755_g5545_i0 PRJEB12237 5741 247 1.320755 3.26226485 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 130 4.78e-34   NR XP_003290152.1 5786 g5545 i0 76.9 7.40890688259109 78 18 94.7 0 236 3 1 78 XP_003290152.1 uncharacterized protein DICPUDRAFT_154640 [Dictyostelium purpureum] diamond 1830 130 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
2260897 2260897 PRJEB12237_P_NODE_7702_length_200_cov_1.454545_g7506_i0 PRJEB12237 7702 200 1.454545 2.90909 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 57.4 1.41e-7   NR PRP79145.1 1890364 g7506 i0 40.9 0.99 66 36 99 1 199 2 333 395 PRP79145.1 aspartic proteinase-like protein 2 isoform 2 [Planoprotostelium fungivorum] diamond 198 57.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
12774284 12774284 PRJEB12237_P_NODE_2371_length_459_cov_1.622642_g2175_i0 PRJEB12237 2371 459 1.622642 7.44792678 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 163 9.62e-49   NR 1PRQ_A 5755 g2175 i0 67.2 1.63398692810458 125 41 81.7 0 433 59 1 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 750 163 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16597466 16597466 PRJEB12237_P_NODE_1454_length_598_cov_2.000000_g1281_i0 PRJEB12237 1454 598 2 11.96 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 290 2.56e-93   NR KYQ90475.1 361077 g1281 i0 72.2 4.94147157190635 198 50 99.3 2 598 5 272 464 KYQ90475.1 protein transport protein SEC61 alpha subunit [Tieghemostelium lacteum] diamond 2955 290 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
23937962 23937962 PRJEB12237_P_NODE_5219_length_266_cov_1.151515_g5023_i0 PRJEB12237 5219 266 1.151515 3.0630299 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 91.7 5.3100000000000005e-21   NR KAH3757948.1 1580589 g5023 i0 50 2.96616541353383 88 44 99.2 0 265 2 2 89 KAH3757948.1 40S ribosomal protein S27a [Pelomyxa schiedti] diamond 789 91.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26937917 26937917 PRJEB12237_P_NODE_9822_length_171_cov_0.838235_g9626_i0 PRJEB12237 9822 171 0.838235 1.43338185 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.2 1.33e-13   NR XP_004338074.1 1257118 g9626 i0 79.6 2.57894736842105 49 10 86 0 169 23 182 230 XP_004338074.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 441 73.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27032928 27032928 PRJEB12237_P_NODE_6742_length_220_cov_1.545946_g6546_i0 PRJEB12237 6742 220 1.545946 3.4010812 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 46.2 0.00163   NR KAH3745657.1 1580589 g6546 i0 37.8 1.00909090909091 74 43 99.5 2 219 1 298 369 KAH3745657.1 hypothetical protein Pelo_12951 [Pelomyxa schiedti] diamond 222 46.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27064574 27064574 PRJEB12237_P_NODE_8762_length_184_cov_1.073826_g8566_i0 PRJEB12237 8762 184 1.073826 1.97583984 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.5 5.33e-7   NR XP_004344664.1 1257118 g8566 i0 56.8 12.4891304347826 37 16 60.3 0 9 119 358 394 XP_004344664.1 ABC1 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 2298 55.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27127403 27127403 PRJEB12237_P_NODE_1402_length_610_cov_2.606957_g1231_i0 PRJEB12237 1402 610 2.606957 15.9024377 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 143 7.8e-38   NR PRP81988.1 1890364 g1231 i0 47.4 2.02622950819672 137 70 66.9 2 50 457 9 144 PRP81988.1 putative nnucleoredoxin [Planoprotostelium fungivorum] diamond 1236 143 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27311402 27311402 PRJEB12237_P_NODE_7783_length_199_cov_1.189024_g7587_i0 PRJEB12237 7783 199 1.189024 2.36615776 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.2 8.34e-11   NR XP_640846.1 352472 g7587 i0 48.1 5.74371859296482 54 28 81.4 0 162 1 112 165 XP_640846.1 Mov34/MPN/PAD-1 family protein [Dictyostelium discoideum AX4] diamond 1143 66.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27974275 27974275 PRJEB12237_P_NODE_12125_length_150_cov_1.686957_g11929_i0 PRJEB12237 12125 150 1.686957 2.5304355 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.7 1.1e-8   NR XP_003284548.1 5786 g11929 i0 56.5 3.8 46 20 92 0 7 144 265 310 XP_003284548.1 uncharacterized protein DICPUDRAFT_148335 [Dictyostelium purpureum] diamond 570 60.1 0.993344425956739 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28012365 28012365 PRJEB12237_P_NODE_7705_length_200_cov_1.448485_g7509_i0 PRJEB12237 7705 200 1.448485 2.89697 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 80.1 5.53e-16   NR KYR02323.1 361077 g7509 i0 56.1 1.98 66 28 99 1 2 199 78 142 KYR02323.1 actin bundling protein [Tieghemostelium lacteum] diamond 396 80.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28075211 28075211 PRJEB12237_P_NODE_4625_length_291_cov_1.699219_g4429_i0 PRJEB12237 4625 291 1.699219 4.94472729 Cavenderia fasciculata 261658 Evosea other_Eukaryota 53.9 7.53e-6   NR XP_004363000.1 261658 g4429 i0 41.8 0.690721649484536 67 37 69.1 2 71 271 480 544 XP_004363000.1 uncharacterized protein DFA_03396 [Cavenderia fasciculata] diamond 201 53.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28201402 28201402 PRJEB12237_P_NODE_7906_length_197_cov_1.234568_g7710_i0 PRJEB12237 7906 197 1.234568 2.43209896 Heterostelium album PN5 2086695 Evosea other_Eukaryota 66.6 3.42e-11   NR XP_020433716.1 670386 g7710 i0 45.3 1.90355329949239 64 35 97.5 0 192 1 122 185 XP_020433716.1 component of the counting factor complex [Heterostelium album PN500] diamond 375 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28226596 28226596 PRJEB12237_P_NODE_10226_length_166_cov_1.404580_g10030_i0 PRJEB12237 10226 166 1.40458 2.3316028 Acytosteliales 2058181 Evosea other_Eukaryota 70.9 1.6e-12   NR XP_004361449.1 261658 g10030 i0 60.7 6.07228915662651 56 21 99.4 1 1 165 685 740 XP_004361449.1 uncharacterized protein DFA_05732 [Cavenderia fasciculata] diamond 1008 70.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28454399 28454399 PRJEB12237_P_NODE_5186_length_267_cov_2.926724_g4990_i0 PRJEB12237 5186 267 2.926724 7.81435308 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 95.9 5.55e-23   NR XP_012758992.1 1410327 g4990 i0 59.3 0.910112359550562 81 33 91 0 23 265 1 81 XP_012758992.1 hypothetical protein SAMD00019534_001050 [Acytostelium subglobosum LB1] diamond 243 95.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28580609 28580609 PRJEB12237_P_NODE_8287_length_191_cov_1.012821_g8091_i0 PRJEB12237 8287 191 1.012821 1.93448811 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.9 1.26e-4   NR XP_004335242.1 1257118 g8091 i0 32.3 0.973821989528796 62 42 97.4 0 2 187 286 347 XP_004335242.1 serine/threonine kinase [Acanthamoeba castellanii str. Neff] diamond 186 48.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28643837 28643837 PRJEB12237_P_NODE_1307_length_634_cov_2.607679_g1141_i0 PRJEB12237 1307 634 2.607679 16.53268486 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 0.0229   NR XP_004334245.1 1257118 g1141 i0 32.1 0.738170347003155 156 83 65.8 9 592 176 4 153 XP_004334245.1 uncharacterized protein ACA1_031140 [Acanthamoeba castellanii str. Neff] diamond 468 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29022902 29022902 PRJEB12237_P_NODE_10888_length_160_cov_1.352000_g10692_i0 PRJEB12237 10888 160 1.352 2.1632 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 44.3 6.84e-4   NR PRP89373.1 1890364 g10692 i0 59 1.40625 39 16 73.1 0 41 157 4 42 PRP89373.1 hypothetical protein PROFUN_01236 [Planoprotostelium fungivorum] diamond 225 44.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29306627 29306627 PRJEB12237_P_NODE_4689_length_288_cov_1.798419_g4493_i0 PRJEB12237 4689 288 1.798419 5.17944672 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 128 4.54e-32   NR PRP81845.1 1890364 g4493 i0 58.9 0.989583333333333 95 39 99 0 2 286 820 914 PRP81845.1 P-type ATPase [Planoprotostelium fungivorum] diamond 285 128 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30159122 30159122 PRJEB12237_P_NODE_10812_length_161_cov_1.142857_g10616_i0 PRJEB12237 10812 161 1.142857 1.83999977 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.7 9.64e-11   NR XP_004335309.1 1257118 g10616 i0 50 0.968944099378882 52 26 96.9 0 3 158 39 90 XP_004335309.1 SCP2 sterol transfer family protein [Acanthamoeba castellanii str. Neff] diamond 156 64.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30222498 30222498 PRJEB12237_P_NODE_1372_length_616_cov_2.734940_g1203_i0 PRJEB12237 1372 616 2.73494 16.8472304 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.1 3e-17   NR XP_004349605.1 1257118 g1203 i0 37.1 0.642857142857143 132 75 60.9 4 544 170 4 134 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 396 85.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31296876 31296876 PRJEB12237_P_NODE_7215_length_210_cov_0.908571_g7019_i0 PRJEB12237 7215 210 0.908571 1.9079991 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 46.2 0.00142   NR KYQ89878.1 361077 g7019 i0 54.3 0.5 35 16 50 0 3 107 154 188 KYQ89878.1 Ankyrin repeat-containing protein [Tieghemostelium lacteum] diamond 105 46.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32151086 32151086 PRJEB12237_P_NODE_9458_length_175_cov_1.142857_g9262_i0 PRJEB12237 9458 175 1.142857 1.99999975 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 73.9 1.5e-13   NR KYQ88330.1 361077 g9262 i0 56.9 0.994285714285714 58 25 99.4 0 1 174 922 979 KYQ88330.1 NAD+ dependent glutamate dehydrogenase [Tieghemostelium lacteum] diamond 174 73.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32372677 32372677 PRJEB12237_P_NODE_7519_length_203_cov_1.904762_g7323_i0 PRJEB12237 7519 203 1.904762 3.86666686 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 70.1 2.92e-13   NR KAH3761877.1 1580589 g7323 i0 51.7 0.857142857142857 58 28 85.7 0 175 2 74 131 KAH3761877.1 multiprotein-bridging factor 1b [Pelomyxa schiedti] diamond 174 70.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32556360 32556360 PRJEB12237_P_NODE_7039_length_214_cov_0.882682_g6843_i0 PRJEB12237 7039 214 0.882682 1.88893948 Eumycetozoa 142796 Evosea other_Eukaryota 80.5 1.24e-15   NR XP_003290864.1 5786 g6843 i0 63.2 2.55140186915888 57 20 79.9 1 197 27 366 421 XP_003290864.1 uncharacterized protein DICPUDRAFT_155396 [Dictyostelium purpureum] diamond 546 80.9 0.995055624227441 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32656502 32656502 PRJEB12237_P_NODE_9320_length_177_cov_1.119718_g9124_i0 PRJEB12237 9320 177 1.119718 1.98190086 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.8 4.73e-19   NR XP_004352467.1 1257118 g9124 i0 66 2.83050847457627 53 18 89.8 0 164 6 82 134 XP_004352467.1 zinc finger domain containing protein [Acanthamoeba castellanii str. Neff] diamond 501 87.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32681750 32681750 PRJEB12237_P_NODE_5720_length_247_cov_2.641509_g5524_i0 PRJEB12237 5720 247 2.641509 6.52452723 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 116 2.1199999999999996e-31   NR 7SOG_A 5755 g5524 i0 67.9 5.79352226720648 81 25 98.4 1 247 5 45 124 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 1431 116 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32814241 32814241 PRJEB12237_P_NODE_6200_length_234_cov_1.206030_g6004_i0 PRJEB12237 6200 234 1.20603 2.8221102 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 129 4.42e-37   NR PRP89405.1 1890364 g6004 i0 73.7 1.92307692307692 76 20 97.4 0 229 2 5 80 PRP89405.1 40S ribosomal protein S21 [Planoprotostelium fungivorum] diamond 450 129 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;