RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27696681 27696681 PRJEB11748_P_NODE_332484_length_205_cov_4.722222_g330301_i0 PRJEB11748 332484 205 4.722222 9.6805551 Hydatigera taeniaeformis 6205 Platyhelminthes Platyhelminthes 42 0.0418   NR VDM24294.1 6205 g330301 i0 43.4 0.775609756097561 53 26 71.7 1 169 23 260 312 VDM24294.1 unnamed protein product [Hydatigera taeniaeformis] diamond 159 42 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
28959593 28959593 PRJEB11748_P_NODE_44508_length_647_cov_40.841297_g42431_i0 PRJEB11748 44508 647 40.841297 264.24319159 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 287 2.48e-91   NR AAX28387.3 6182 g42431 i0 98.7 4.96599690880989 153 2 70.9 0 142 600 299 451 AAX28387.3 SJCHGC01615 protein, partial [Schistosoma japonicum] diamond 3213 287 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30254213 30254213 PRJEB11748_P_NODE_116712_length_384_cov_10.390093_g114538_i0 PRJEB11748 116712 384 10.390093 39.89795712 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 76.3 6.26e-15   NR AAX24812.2 6182 g114538 i0 70.6 1.1640625 51 10 39.8 1 38 190 11 56 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 447 76.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;