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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB11748 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1288062 1288062 PRJEB11748_P_NODE_100502_length_416_cov_20.064789_g98332_i0 PRJEB11748 100502 416 20.064789 83.46952224 Toxocara canis 6265 Nematoda Nematoda 135 4.21e-34   NR KHN73621.1 6265 g98332 i0 88.2 3.83653846153846 76 9 54.8 0 23 250 472 547 KHN73621.1 ATP synthase subunit beta, mitochondrial [Toxocara canis] diamond 1596 135 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
15011663 15011663 PRJEB11748_P_NODE_24352_length_916_cov_16.679532_g22705_i0 PRJEB11748 24352 916 16.679532 152.78451312 Nematoda 6231 Nematoda Nematoda 351 5.4599999999999985e-115   NR KHN79989.1 6265 g22705 i0 65.7 1.5 230 78 75 1 705 19 171 400 KHN79989.1 Inactive rhomboid protein 1 [Toxocara canis] diamond 1374 351 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27538498 27538498 PRJEB11748_P_NODE_214584_length_271_cov_27.952381_g212401_i0 PRJEB11748 214584 271 27.952381 75.75095251 Mesorhabditis belari 2138241 Nematoda Nematoda 67.8 7.6e-12   NR CAJ0960039.1 2138241 g212401 i0 96.4 0.309963099630996 28 1 31 0 81 164 115 142 CAJ0960039.1 unnamed protein product, partial [Mesorhabditis belari] diamond 84 67.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
27601853 27601853 PRJEB11748_P_NODE_48604_length_616_cov_21.513514_g46508_i0 PRJEB11748 48604 616 21.513514 132.52324624 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 77 1.9e-12   NR CAD6198734.1 2777116 g46508 i0 41.9 1.00811688311688 105 45 51.1 1 578 264 766 854 CAD6198734.1 unnamed protein product [Caenorhabditis auriculariae] diamond 621 77 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
28169914 28169914 PRJEB11748_P_NODE_259646_length_241_cov_2.188889_g257463_i0 PRJEB11748 259646 241 2.188889 5.27522249 Ancylostoma ceylanicum 53326 Nematoda Nematoda 139 1.0699999999999998e-37   NR EPB65693.1 53326 g257463 i0 84.5 0.883817427385892 71 11 88.4 0 6 218 229 299 EPB65693.1 WD40-like protein, partial [Ancylostoma ceylanicum] diamond 213 139 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
28517386 28517386 PRJEB11748_P_NODE_366547_length_189_cov_5.000000_g364364_i0 PRJEB11748 366547 189 5 9.45 Angiostrongylus costaricensis 334426 Nematoda Nematoda 50.1 3.15e-5   NR VDM57338.1 334426 g364364 i0 50 1.17460317460317 42 21 66.7 0 186 61 164 205 VDM57338.1 unnamed protein product [Angiostrongylus costaricensis] diamond 222 50.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus costaricensis
29716855 29716855 PRJEB11748_P_NODE_384210_length_176_cov_8.078261_g382027_i0 PRJEB11748 384210 176 8.078261 14.21773936 Wuchereria bancrofti 6293 Nematoda Nematoda 99.8 1.2800000000000001e-22   NR VDM09662.1 6293 g382027 i0 98 0.869318181818182 51 1 86.9 0 24 176 362 412 VDM09662.1 unnamed protein product [Wuchereria bancrofti] diamond 153 99.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
30222320 30222320 PRJEB11748_P_NODE_186292_length_296_cov_2.178723_g184109_i0 PRJEB11748 186292 296 2.178723 6.44902008 Caenorhabditis brenneri 135651 Nematoda Nematoda 80.1 4.84e-15   NR EGT53782.1 135651 g184109 i0 46.1 0.902027027027027 89 48 90.2 0 23 289 311 399 EGT53782.1 hypothetical protein CAEBREN_30708, partial [Caenorhabditis brenneri] diamond 267 80.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
30469284 30469284 PRJEB11748_P_NODE_355593_length_195_cov_2.492537_g353410_i0 PRJEB11748 355593 195 2.492537 4.86044715 root 1 Root_unresolved Root_unresolved 100 3.309999999999999e-23   NR KAK6048272.1 27828 g353410 i0 75.4 2.83076923076923 61 15 93.8 0 184 2 316 376 KAK6048272.1 hypothetical protein COOONC_14223 [Cooperia oncophora] diamond 552 101 0.99009900990099 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
32049679 32049679 PRJEB11748_P_NODE_139438_length_349_cov_3.298611_g137260_i0 PRJEB11748 139438 349 3.298611 11.51215239 Opisthokonta 33154 Nematoda Nematoda 73.9 1.12e-12   NR KHN87376.1 6265 g137260 i0 71.4 7.48710601719198 42 12 36.1 0 333 208 328 369 KHN87376.1 Proteasome subunit alpha type-2 [Toxocara canis] diamond 2613 74.3 0.994616419919246 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
32246088 32246088 PRJEB11748_P_NODE_180958_length_301_cov_2.495833_g178775_i0 PRJEB11748 180958 301 2.495833 7.51245733 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 46.6 0.00343   NR KAE9555067.1 2598192 g178775 i0 35.7 0.837209302325581 84 47 82.7 2 28 276 1198 1275 KAE9555067.1 hypothetical protein FO519_001728 [Halicephalobus sp. NKZ332] diamond 252 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;