RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19140752 19140752 PRJEB11748_P_NODE_167616_length_314_cov_31.241107_g165433_i0 PRJEB11748 167616 314 31.241107 98.09707598 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 100 3.45e-22   NR XP_044544379.1 51637 g165433 i0 66.2 2.56050955414013 68 23 65 0 33 236 435 502 XP_044544379.1 uncharacterized protein C9374_010209 [Naegleria lovaniensis] diamond 804 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28580513 28580513 PRJEB11748_P_NODE_326687_length_207_cov_17.924658_g324504_i0 PRJEB11748 326687 207 17.924658 37.10404206 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 62.4 2.83e-9   NR XP_044565509.1 5763 g324504 i0 43.1 1.88405797101449 65 37 94.2 0 7 201 815 879 XP_044565509.1 uncharacterized protein FDP41_013279 [Naegleria fowleri] diamond 390 62.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30943109 30943109 PRJEB11748_P_NODE_86174_length_451_cov_11.605128_g84009_i0 PRJEB11748 86174 451 11.605128 52.33912728 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.2 1.64e-9   NR XP_002678473.1 5762 g84009 i0 38.1 7.00443458980044 105 60 69.8 3 22 336 242 341 XP_002678473.1 uncharacterized protein NAEGRDRAFT_56126 [Naegleria gruberi] diamond 3159 66.6 0.993993993993994 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;