RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB11748 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11497306 11497306 PRJEB11748_P_NODE_44990_length_643_cov_87.594502_g42908_i0 PRJEB11748 44990 643 87.594502 563.23264786 Thoreauomyces humboldtii 1396496 Fungi Fungi 215 4.43e-68   NR KAJ3015774.1 1396496 g42908 i0 68.2 0.690513219284603 148 46 69.1 1 566 123 1 147 KAJ3015774.1 Lactoylglutathione lyase [Thoreauomyces humboldtii] diamond 444 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Thoreauomyces Thoreauomyces humboldtii
17869106 17869106 PRJEB11748_P_NODE_27735_length_849_cov_17.276650_g25969_i0 PRJEB11748 27735 849 17.27665 146.6787585 Fungi 4751 Fungi Fungi 219 1.6099999999999999e-68   NR XP_006680941.1 684364 g25969 i0 90.9 36.2614840989399 121 11 42.8 0 840 478 30 150 XP_006680941.1 uncharacterized protein BATDEDRAFT_90434 [Batrachochytrium dendrobatidis JAM81] diamond 30786 221 0.990950226244344 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
22968961 22968961 PRJEB11748_P_NODE_263859_length_238_cov_12.259887_g261676_i0 PRJEB11748 263859 238 12.259887 29.17853106 Chytriomycetaceae 1352827 Fungi Fungi 75.9 2.47e-15   NR KAJ3231220.1 4814 g261676 i0 60.3 7.70168067226891 68 24 84.5 3 217 17 75 140 KAJ3231220.1 40s ribosomal protein L44e [Chytriomyces hyalinus] diamond 1833 76.3 0.99475753604194 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
27444093 27444093 PRJEB11748_P_NODE_359783_length_192_cov_25.687023_g357600_i0 PRJEB11748 359783 192 25.687023 49.31908416 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 90.9 2.06e-19   NR KAH9254398.1 1357716 g357600 i0 72.4 0.90625 58 13 85.9 1 24 188 806 863 KAH9254398.1 hypothetical protein BASA81_007511 [Batrachochytrium salamandrivorans] diamond 174 90.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
27728185 27728185 PRJEB11748_P_NODE_167724_length_314_cov_12.798419_g165541_i0 PRJEB11748 167724 314 12.798419 40.18703566 Borealophlyctis nickersoniae 2735257 Fungi Fungi 86.7 2.98e-17   NR KAJ3275968.1 2735257 g165541 i0 74 0.477707006369427 50 13 47.8 0 292 143 446 495 KAJ3275968.1 hypothetical protein HK104_003809 [Borealophlyctis nickersoniae] diamond 150 86.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
28138687 28138687 PRJEB11748_P_NODE_51685_length_596_cov_6.910280_g49576_i0 PRJEB11748 51685 596 6.91028 41.1852688 Quaeritorhiza haematococci 2654861 Fungi Fungi 63.2 9.08e-8   NR KAJ3087548.1 2654861 g49576 i0 58.9 0.281879194630872 56 19 27.2 2 374 535 57 110 KAJ3087548.1 hypothetical protein HK102_010817 [Quaeritorhiza haematococci] diamond 168 63.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
28574125 28574125 PRJEB11748_P_NODE_340227_length_202_cov_4.879433_g338044_i0 PRJEB11748 340227 202 4.879433 9.85645466 root 1 Root_unresolved Root_unresolved 43.1 0.0158   NR RKO88668.1 388810 g338044 i0 71.4 7.64851485148515 28 8 41.6 0 98 181 9 36 RKO88668.1 hypothetical protein BDK51DRAFT_36230 [Blyttiomyces helicus] diamond 1545 43.5 0.990804597701149 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces helicus
28706748 28706748 PRJEB11748_P_NODE_221507_length_266_cov_5.590244_g219324_i0 PRJEB11748 221507 266 5.590244 14.87004904 Chytriomyces sp. MP71 1882861 Fungi Fungi 85.1 2.46e-19   NR KAI8611562.1 1882861 g219324 i0 60.3 5.33458646616541 63 25 71.1 0 189 1 6 68 KAI8611562.1 ubiquitin-like protein Atg12 [Chytriomyces sp. MP71] diamond 1419 85.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces sp. MP71
28921328 28921328 PRJEB11748_P_NODE_257528_length_242_cov_3.900552_g255345_i0 PRJEB11748 257528 242 3.900552 9.43933584 Fungi 4751 Fungi Fungi 120 5.500000000000001e-30   NR TPX70427.1 117820 g255345 i0 79.7 21.5702479338843 69 14 85.5 0 3 209 408 476 TPX70427.1 hypothetical protein SpCBS45565_g01760 [Spizellomyces sp. 'palustris'] diamond 5220 121 0.991735537190083 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
29748280 29748280 PRJEB11748_P_NODE_195891_length_287_cov_3.765487_g193708_i0 PRJEB11748 195891 287 3.765487 10.80694769 Gonapodya prolifera JEL478 1344416 Fungi Fungi 102 5.93e-26   NR KXS13505.1 1344416 g193708 i0 81.8 1.37979094076655 66 12 69 0 33 230 50 115 KXS13505.1 ribosomal protein L36e [Gonapodya prolifera JEL478] diamond 396 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya prolifera
30222386 30222386 PRJEB11748_P_NODE_264452_length_238_cov_3.570621_g262269_i0 PRJEB11748 264452 238 3.570621 8.49807798 Hyaloraphidium curvatum 82268 Fungi Fungi 90.9 4.68e-20   NR KAI9014143.1 82268 g262269 i0 68.3 4.73949579831933 63 16 74.4 1 2 178 197 259 KAI9014143.1 ribosomal family S4e-domain-containing protein [Hyaloraphidium curvatum] diamond 1128 90.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30285982 30285982 PRJEB11748_P_NODE_15772_length_1180_cov_7.928508_g14463_i0 PRJEB11748 15772 1180 7.928508 93.5563944 Phlyctochytrium planicorne 261098 Fungi Fungi 78.6 1.03e-11   NR KAJ3099763.1 261098 g14463 i0 30.2 0.874576271186441 179 121 45 2 813 283 244 420 KAJ3099763.1 hypothetical protein HDU97_002789 [Phlyctochytrium planicorne] diamond 1032 78.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
30569844 30569844 PRJEB11748_P_NODE_75693_length_484_cov_2.330969_g73536_i0 PRJEB11748 75693 484 2.330969 11.28188996 Boothiomyces sp. JEL 2170262 Fungi Fungi 155 1.58e-43   NR KAJ3320513.1 2724215 g73536 i0 81 0.520661157024793 84 16 52.1 0 481 230 148 231 KAJ3320513.1 snoRNA-binding rRNA-processing protein imp4 [Boothiomyces sp. JEL0866] diamond 252 155 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Boothiomyces Boothiomyces sp. JEL0866
31771083 31771083 PRJEB11748_P_NODE_118517_length_381_cov_7.559375_g116342_i0 PRJEB11748 118517 381 7.559375 28.80121875 Cladochytrium tenue 1604274 Fungi Fungi 105 7.399999999999998e-25   NR KAJ1543824.1 1604274 g116342 i0 51 1.50393700787402 96 47 75.6 0 3 290 189 284 KAJ1543824.1 hypothetical protein HK405_009045 [Cladochytrium tenue] diamond 573 105 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
31859770 31859770 PRJEB11748_P_NODE_233557_length_257_cov_33.448980_g231374_i0 PRJEB11748 233557 257 33.44898 85.9638786 Batrachochytrium 100474 Fungi Fungi 45.1 0.00682   NR KAL5033526.1 109871 g231374 i0 33.8 1.5875486381323 68 45 79.4 0 210 7 116 183 KAL5033526.1 hypothetical protein RTP6_001481 [Batrachochytrium dendrobatidis] diamond 408 45.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
32176560 32176560 PRJEB11748_P_NODE_55618_length_572_cov_4.317025_g53497_i0 PRJEB11748 55618 572 4.317025 24.693383 Chytridiomycetes 451435 Fungi Fungi 201 1.32e-60   NR KAJ3050614.1 64517 g53497 i0 59.2 3.28321678321678 157 59 82.3 1 572 102 148 299 KAJ3050614.1 hypothetical protein HK097_008393 [Rhizophlyctis rosea] diamond 1878 203 0.990147783251232 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;