RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Wildermuthiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Wildermuthiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27222322 27222322 PRJEB11748_P_NODE_293083_length_223_cov_1.450617_g290900_i0 PRJEB11748 293083 223 1.450617 3.23487591 Candidatus Wildermuthbacteria bacterium 2053642 Bacteria Bacteria 47.4 6.76e-4   NR MBI2642484.1 2053642 g290900 i0 38.5 0.874439461883408 65 35 87.4 2 222 28 3 62 MBI2642484.1 arginine--tRNA ligase [Candidatus Wildermuthbacteria bacterium] diamond 195 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Wildermuthiibacteriota         Candidatus Wildermuthbacteria bacterium
27342945 27342945 PRJEB11748_P_NODE_127423_length_366_cov_44.796721_g125246_i0 PRJEB11748 127423 366 44.796721 163.95599886 Bacteria 2 Bacteria Bacteria 84.7 2.03e-17   NR OHA66837.1 1802450 g125246 i0 66.7 1.31967213114754 54 18 44.3 0 193 354 6 59 OHA66837.1 MAG: hypothetical protein A3C04_03345 [Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25] diamond 483 84.7 1 Bacteria Bacteria candidate phyla   Candidatus Wildermuthiibacteriota         Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25
30064337 30064337 PRJEB11748_P_NODE_219892_length_267_cov_12.436893_g217709_i0 PRJEB11748 219892 267 12.436893 33.20650431 Candidatus Wildermuthbacteria bacterium 2053642 Bacteria Bacteria 91.7 3.29e-19   NR MBI4138439.1 2053642 g217709 i0 57.3 0.921348314606742 82 35 92.1 0 13 258 273 354 MBI4138439.1 fibronectin type III domain-containing protein [Candidatus Wildermuthbacteria bacterium] diamond 246 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Wildermuthiibacteriota         Candidatus Wildermuthbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;