RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Sysuimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sysuimicrobiota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJEB11748 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26906368 26906368 PRJEB11748_P_NODE_315962_length_212_cov_2.562914_g313779_i0 PRJEB11748 315962 212 2.562914 5.43337768 Candidatus Sysuimicrobium tengchongense 3377995 Bacteria Bacteria 59.7 2.58e-8   NR MDR7415068.1 3377995 g313779 i0 47.6 0.891509433962264 63 31 86.3 1 203 21 342 404 MDR7415068.1 AAA family ATPase [Candidatus Sysuimicrobium tengchongense] diamond 189 59.7 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Sysuimicrobiaceae Candidatus Sysuimicrobium Candidatus Sysuimicrobium tengchongense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;