RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Sungiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sungiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6392550 6392550 PRJEB11748_P_NODE_126906_length_367_cov_12.441176_g124729_i0 PRJEB11748 126906 367 12.441176 45.65911592 Candidatus Sungiibacteriota bacterium 2750080 Bacteria Bacteria 173 5.01e-48   NR MBI4225157.1 2750080 g124729 i0 94.6 0.760217983651226 93 5 76 0 24 302 472 564 MBI4225157.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Candidatus Sungiibacteriota bacterium] diamond 279 173 1 Bacteria Bacteria candidate phyla   Candidatus Sungiibacteriota         Candidatus Sungiibacteriota bacterium
27822764 27822764 PRJEB11748_P_NODE_257444_length_242_cov_4.558011_g255261_i0 PRJEB11748 257444 242 4.558011 11.03038662 Candidatus Sungbacteria bacterium RIFCSPHIGHO2_ 1802272 Bacteria Bacteria 67.8 5.22e-13   NR OHA01148.1 1802272 g255261 i0 61.5 0.644628099173554 52 18 64.5 1 23 178 10 59 OHA01148.1 MAG: hypothetical protein A3C12_01935 [Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_49_20] diamond 156 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Sungiibacteriota         Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_49_20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;