RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26811349 26811349 PRJEB11748_P_NODE_213821_length_272_cov_4.312796_g211638_i0 PRJEB11748 213821 272 4.312796 11.73080512 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 98.6 1.25e-21   NR HOI88911.1 3022866 g211638 i0 98 1.65441176470588 50 1 55.1 0 102 251 728 777 HOI88911.1 HEAT repeat domain-containing protein [Candidatus Rifleibacterium sp.] diamond 450 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.
27285748 27285748 PRJEB11748_P_NODE_321483_length_210_cov_1.046980_g319300_i0 PRJEB11748 321483 210 1.04698 2.198658 Candidatus Riflebacteria bacterium HGW-Riflebacteria-1 2013829 Bacteria Bacteria 90.1 3.57e-20   NR PKL41721.1 2013829 g319300 i0 76.3 1.68571428571429 59 14 84.3 0 208 32 11 69 PKL41721.1 MAG: sel1 repeat family protein [Candidatus Riflebacteria bacterium HGW-Riflebacteria-1] diamond 354 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Riflebacteria bacterium HGW-Riflebacteria-1
29716819 29716819 PRJEB11748_P_NODE_322830_length_209_cov_2.722973_g320647_i0 PRJEB11748 322830 209 2.722973 5.69101357 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 132 1.51e-35   NR HNW12753.1 3022866 g320647 i0 91 1.92344497607656 67 6 96.2 0 2 202 48 114 HNW12753.1 hypothetical protein [Candidatus Rifleibacterium sp.] diamond 402 132 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;