RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Microgenomatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Microgenomatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28075104 28075104 PRJEB11748_P_NODE_277545_length_231_cov_1.505882_g275362_i0 PRJEB11748 277545 231 1.505882 3.47858742 Candidatus Microgenomates bacterium 2093373 Bacteria Bacteria 70.9 4.62e-14   NR NMC08827.1 2093373 g275362 i0 72.5 0.519480519480519 40 11 51.9 0 59 178 40 79 NMC08827.1 hypothetical protein [Candidatus Microgenomates bacterium] diamond 120 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Candidatus Microgenomates bacterium
30633060 30633060 PRJEB11748_P_NODE_350253_length_197_cov_31.882353_g348070_i0 PRJEB11748 350253 197 31.882353 62.80823541 Candidatus Microgenomates bacterium 2093373 Bacteria Bacteria 56.6 2.62e-7   NR RJR28689.1 2093373 g348070 i0 74.3 0.532994923857868 35 9 53.3 0 161 57 1477 1511 RJR28689.1 MAG: MerR family DNA-binding transcriptional regulator [Candidatus Microgenomates bacterium] diamond 105 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         Candidatus Microgenomates bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;