RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_phylum = "Candidatus Daviesiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Daviesiibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB11748 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26684609 26684609 PRJEB11748_P_NODE_358601_length_193_cov_6.068182_g356418_i0 PRJEB11748 358601 193 6.068182 11.71159126 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 64.7 2.15e-10   NR MBI2596870.1 2053542 g356418 i0 64.6 0.746113989637306 48 17 74.6 0 170 27 5 52 MBI2596870.1 glycosyltransferase [Candidatus Daviesbacteria bacterium] diamond 144 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
27032891 27032891 PRJEB11748_P_NODE_55242_length_574_cov_7.775828_g53121_i0 PRJEB11748 55242 574 7.775828 44.63325272 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 177 1.2299999999999999e-47   NR MBI2018248.1 2053542 g53121 i0 75 1.18118466898955 112 28 58.5 0 358 23 511 622 MBI2018248.1 DUF4012 domain-containing protein [Candidatus Daviesbacteria bacterium] diamond 678 177 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
28927742 28927742 PRJEB11748_P_NODE_370608_length_187_cov_5.039683_g368425_i0 PRJEB11748 370608 187 5.039683 9.42420721 Candidatus Daviesbacteria bacterium GW2 2053542 Bacteria Bacteria 68.6 1.39e-11   NR KKQ59638.1 1618421 g368425 i0 60 0.962566844919786 60 15 81.8 1 165 13 290 349 KKQ59638.1 MAG: Phosphoenolpyruvate synthase [Candidatus Daviesbacteria bacterium GW2011_GWA2_38_17] diamond 180 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWA2_38_17
30032886 30032886 PRJEB11748_P_NODE_172771_length_309_cov_4.495968_g170588_i0 PRJEB11748 172771 309 4.495968 13.89254112 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 123 4.529999999999999e-31   NR MBI4038830.1 2053542 g170588 i0 82.4 3.96116504854369 68 12 66 0 289 86 87 154 MBI4038830.1 LCP family protein [Candidatus Daviesbacteria bacterium] diamond 1224 123 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
30033093 30033093 PRJEB11748_P_NODE_80371_length_468_cov_30.125307_g78207_i0 PRJEB11748 80371 468 30.125307 140.98643676 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 75.1 2.26e-12   NR MBI2334617.1 2053542 g78207 i0 34.4 1.78846153846154 151 86 95.5 6 465 19 500 639 MBI2334617.1 hypothetical protein [Candidatus Daviesbacteria bacterium] diamond 837 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
32056004 32056004 PRJEB11748_P_NODE_369878_length_187_cov_14.325397_g367695_i0 PRJEB11748 369878 187 14.325397 26.78849239 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 57 5.36e-9   NR MBI4036096.1 2053542 g367695 i0 78.1 2.05347593582888 32 7 51.3 0 97 2 1 32 MBI4036096.1 50S ribosomal protein L35 [Candidatus Daviesbacteria bacterium] diamond 384 57 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;