RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11748" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJEB11748 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2570422 2570422 PRJEB11748_P_NODE_94463_length_430_cov_7.869919_g92295_i0 PRJEB11748 94463 430 7.869919 33.8406517 Inoviridae sp. 2219103 Viruses Viruses 60.5 6e-9   NR XOE93905.1 2219103 g92295 i0 56 0.669767441860465 50 22 34.9 0 23 172 39 88 XOE93905.1 MAG: hypothetical protein [Inoviridae sp.] diamond 288 60.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
26811384 26811384 PRJEB11748_P_NODE_271181_length_234_cov_5.578035_g268998_i0 PRJEB11748 271181 234 5.578035 13.0526019 Inoviridae sp. 2219103 Viruses Viruses 53.9 3.76e-6   NR XOF02038.1 2219103 g268998 i0 93.1 0.371794871794872 29 2 37.2 0 108 22 304 332 XOF02038.1 MAG: replication initiation protein [Inoviridae sp.] diamond 87 53.9 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
28169789 28169789 PRJEB11748_P_NODE_107906_length_401_cov_5.350000_g105732_i0 PRJEB11748 107906 401 5.35 21.4535 Inoviridae sp. 2219103 Viruses Viruses 143 1.8799999999999993e-40   NR XOF04190.1 2219103 g105732 i0 57.1 1.79551122194514 126 40 83.8 2 338 3 55 180 XOF04190.1 MAG: hypothetical protein [Inoviridae sp.] diamond 720 143 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;