contig_metadata
3 rows where analysis = "diamond", bioproject = "PRJEB11523" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21384654 | 21384654 | PRJEB11523_P_NODE_4177_length_234_cov_1.605405_g4099_i0 | PRJEB11523 | 4177 | 234 | 1.605405 | 3.7566477 | Oikopleura dioica | 34765 | Chordata | Chordata | 116 | 2.06e-28 | NR | CAG5090479.1 | 34765 | g4099 | i0 | 71 | 0.884615384615385 | 69 | 20 | 88.5 | 0 | 2 | 208 | 469 | 537 | CAG5090479.1 Oidioi.mRNA.OKI2018_I69.PAR.g12618.t1.cds [Oikopleura dioica] | diamond | 207 | 116 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Appendicularia | Copelata | Oikopleuridae | Oikopleura | Oikopleura dioica | |
| 27633122 | 27633122 | PRJEB11523_P_NODE_3644_length_255_cov_0.966019_g3566_i0 | PRJEB11523 | 3644 | 255 | 0.966019 | 2.46334845 | Staurois parvus | 386267 | Chordata | Chordata | 58.5 | 7.68e-9 | NR | CAI9547784.1 | 386267 | g3566 | i0 | 68.6 | 0.411764705882353 | 35 | 11 | 41.2 | 0 | 105 | 1 | 50 | 84 | CAI9547784.1 unnamed protein product, partial [Staurois parvus] | diamond | 105 | 58.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Ranidae | Staurois | Staurois parvus | |
| 28769645 | 28769645 | PRJEB11523_P_NODE_6147_length_186_cov_12.007299_g6069_i0 | PRJEB11523 | 6147 | 186 | 12.007299 | 22.33357614 | Urocitellus parryii | 9999 | Chordata | Chordata | 41.6 | 0.0451 | NR | XP_026266854.1 | 9999 | g6069 | i0 | 47.8 | 0.741935483870968 | 46 | 23 | 74.2 | 1 | 145 | 8 | 1076 | 1120 | XP_026266854.1 voltage-dependent calcium channel subunit alpha-2/delta-4 [Urocitellus parryii] | diamond | 138 | 41.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Sciuridae | Urocitellus | Urocitellus parryii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;