RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11523" and tax_phylum = "Candidatus Tayloriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tayloriibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB11523 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22659518 22659518 PRJEB11523_P_NODE_3238_length_276_cov_11.339207_g3160_i0 PRJEB11523 3238 276 11.339207 31.29621132 Bacteria 2 Bacteria Bacteria 67.8 8.86e-11   NR OHA27550.1 1802311 g3160 i0 38 1.71739130434783 79 47 85.9 1 270 34 280 356 OHA27550.1 MAG: hypothetical protein A3D56_02535 [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_45_35] diamond 474 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_45_35
26843068 26843068 PRJEB11523_P_NODE_5021_length_209_cov_3.225000_g4943_i0 PRJEB11523 5021 209 3.225 6.74025 Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_43_2 1802332 Bacteria Bacteria 125 9.16e-33   NR OHA41340.1 1802332 g4943 i0 84.1 0.990430622009569 69 11 99 0 209 3 72 140 OHA41340.1 MAG: hypothetical protein A3G52_02575 [Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_43_20] diamond 207 125 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPLOWO2_12_FULL_43_20
28959377 28959377 PRJEB11523_P_NODE_5208_length_205_cov_0.942308_g5130_i0 PRJEB11523 5208 205 0.942308 1.9317314 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 89.4 2.23e-19   NR HAO64472.1 2052153 g5130 i0 73.7 0.834146341463415 57 15 83.4 0 173 3 1 57 HAO64472.1 hypothetical protein [Candidatus Taylorbacteria bacterium] diamond 171 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;