RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJEB11523" and tax_phylum = "Candidatus Cryosericota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cryosericota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJEB11523 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31169944 31169944 PRJEB11523_P_NODE_3455_length_264_cov_8.358140_g3377_i0 PRJEB11523 3455 264 8.35814 22.0654896 Candidatus Cryosericum sp. 2815585 Bacteria Bacteria 85.1 4.41e-17   NR HOV50549.1 2815585 g3377 i0 51.9 0.897727272727273 79 38 89.8 0 241 5 52 130 HOV50549.1 transposase [Candidatus Cryosericum sp.] diamond 237 85.1 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Candidatus Cryosericota Candidatus Cryosericia Candidatus Cryosericales Candidatus Cryosericaceae Candidatus Cryosericum Candidatus Cryosericum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;