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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJEB11523" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJEB11523 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3533152 3533152 PRJEB11523_P_NODE_3043_length_288_cov_4.100418_g2965_i0 PRJEB11523 3043 288 4.100418 11.80920384 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 150 6.4e-44   NR MBX3019228.1 2026715 g2965 i0 85.9 2.61458333333333 85 12 88.5 0 277 23 75 159 MBX3019228.1 F0F1 ATP synthase subunit beta [Pseudobdellovibrionaceae bacterium] diamond 753 150 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
8940714 8940714 PRJEB11523_P_NODE_2608_length_320_cov_17.033210_g2530_i0 PRJEB11523 2608 320 17.03321 54.506272 Bdellovibrio svalbardensis 2972972 Bacteria Bacteria 179 7.2899999999999995e-53   NR WP_277577659.1 2972972 g2530 i0 87.9 0.928125 99 12 92.8 0 10 306 76 174 WP_277577659.1 hypothetical protein [Bdellovibrio svalbardensis] diamond 297 179 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio svalbardensis
12461624 12461624 PRJEB11523_P_NODE_3990_length_240_cov_10.335079_g3912_i0 PRJEB11523 3990 240 10.335079 24.8041896 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 62.4 4.23e-9   NR MCB0346244.1 2053517 g3912 i0 58 2.0625 50 21 62.5 0 173 24 407 456 MCB0346244.1 AAA family ATPase [Bdellovibrionales bacterium] diamond 495 62.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
15315943 15315943 PRJEB11523_P_NODE_1393_length_487_cov_6.041096_g1315_i0 PRJEB11523 1393 487 6.041096 29.42013752 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 61.6 1.17e-7   NR WP_413287619.1 3394358 g1315 i0 36.7 0.554414784394251 90 48 51.7 3 406 155 206 292 WP_413287619.1 hypothetical protein [Bdellovibrio sp. HCB337] diamond 270 61.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
26715796 26715796 PRJEB11523_P_NODE_3921_length_243_cov_7.958763_g3843_i0 PRJEB11523 3921 243 7.958763 19.33979409 Bdellovibrio sp. 28-41-41 1970323 Bacteria Bacteria 84.7 6.13e-17   NR OYZ24114.1 1970323 g3843 i0 56.9 1.77777777777778 72 31 88.9 0 5 220 149 220 OYZ24114.1 MAG: hypothetical protein B7Y39_02630 [Bdellovibrio sp. 28-41-41] diamond 432 84.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. 28-41-41
26969366 26969366 PRJEB11523_P_NODE_4882_length_213_cov_2.048780_g4804_i0 PRJEB11523 4882 213 2.04878 4.3639014 Bdellovibrio sp. NC 28201 Bacteria Bacteria 112 4.7e-27   NR WP_142697576.1 2220073 g4804 i0 80.9 0.957746478873239 68 13 95.8 0 2 205 358 425 WP_142697576.1 aspartate--tRNA ligase [Bdellovibrio sp. NC01] diamond 204 112 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. NC01
27000898 27000898 PRJEB11523_P_NODE_7762_length_166_cov_0.871795_g7684_i0 PRJEB11523 7762 166 0.871795 1.4471797 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 79.7 1.17e-15   NR MFN8391120.1 3034175 g7684 i0 66.7 1.95180722891566 54 18 97.6 0 164 3 20 73 MFN8391120.1 DNA polymerase I [Bdellovibrionota bacterium] diamond 324 79.7 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27980379 27980379 PRJEB11523_P_NODE_7905_length_165_cov_0.879310_g7827_i0 PRJEB11523 7905 165 0.87931 1.4508615 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 98.2 1.52e-24   NR MCM2349922.1 2081706 g7827 i0 81.5 0.981818181818182 54 10 98.2 0 163 2 16 69 MCM2349922.1 PaaI family thioesterase [Bacteriovoracaceae bacterium] diamond 162 98.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28232687 28232687 PRJEB11523_P_NODE_4506_length_223_cov_1.172414_g4428_i0 PRJEB11523 4506 223 1.172414 2.61448322 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 143 9.62e-40   NR MDH4467768.1 2081706 g4428 i0 93.2 0.982062780269058 73 5 98.2 0 221 3 54 126 MDH4467768.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 219 143 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28706655 28706655 PRJEB11523_P_NODE_1267_length_517_cov_26.190171_g1190_i0 PRJEB11523 1267 517 26.190171 135.40318407 Bdellovibrio sp. BCCA 3136281 Bacteria Bacteria 72.8 2.15e-11   NR WP_340591252.1 3136281 g1190 i0 32.7 0.870406189555126 150 93 86.5 4 24 470 274 416 WP_340591252.1 alkaline phosphatase D family protein [Bdellovibrio sp. BCCA] diamond 450 72.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. BCCA
28864353 28864353 PRJEB11523_P_NODE_8448_length_162_cov_0.902655_g8370_i0 PRJEB11523 8448 162 0.902655 1.4623011 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 71.6 4.71e-13   NR MCM2349925.1 2081706 g8370 i0 53.7 1 54 25 100 0 1 162 57 110 MCM2349925.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 162 71.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28959373 28959373 PRJEB11523_P_NODE_2688_length_312_cov_22.216730_g2610_i0 PRJEB11523 2688 312 22.21673 69.3161976 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 137 3.71e-35   NR HPI40107.1 2026715 g2610 i0 63.7 0.875 91 33 87.5 0 290 18 65 155 HPI40107.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 273 137 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
29653398 29653398 PRJEB11523_P_NODE_5310_length_202_cov_10.660131_g5232_i0 PRJEB11523 5310 202 10.660131 21.53346462 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 45.4 0.00163   NR HEY8270081.1 2026715 g5232 i0 66.7 0.445544554455446 30 10 44.6 0 169 80 156 185 HEY8270081.1 DUF4143 domain-containing protein [Pseudobdellovibrionaceae bacterium] diamond 90 45.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
29969521 29969521 PRJEB11523_P_NODE_4511_length_222_cov_20.855491_g4433_i0 PRJEB11523 4511 222 20.855491 46.29919002 Oligoflexia bacterium 2599941 Bacteria Bacteria 47.8 4.5e-4   NR MCO5141707.1 2599941 g4433 i0 42.3 0.702702702702703 52 28 67.6 1 172 23 13 64 MCO5141707.1 hypothetical protein [Oligoflexia bacterium] diamond 156 47.8 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
30095811 30095811 PRJEB11523_P_NODE_2972_length_292_cov_15.106996_g2894_i0 PRJEB11523 2972 292 15.106996 44.11242832 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 77.4 1.01e-14   NR MEZ4741646.1 3034175 g2894 i0 58.1 0.636986301369863 62 25 63.7 1 269 84 29 89 MEZ4741646.1 hypothetical protein [Bdellovibrionota bacterium] diamond 186 77.4 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30127253 30127253 PRJEB11523_P_NODE_1492_length_467_cov_3.500000_g1414_i0 PRJEB11523 1492 467 3.5 16.345 Oligoflexia bacterium 2599941 Bacteria Bacteria 162 1.97e-43   NR MBC7396357.1 2599941 g1414 i0 56 0.963597430406852 150 66 96.4 0 460 11 1 150 MBC7396357.1 hypothetical protein [Oligoflexia bacterium] diamond 450 162 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
30254199 30254199 PRJEB11523_P_NODE_4212_length_232_cov_19.240437_g4134_i0 PRJEB11523 4212 232 19.240437 44.63781384 Bdellovibrio sp. 28201 Bacteria Bacteria 124 3.98e-33   NR MBC7741172.1 28201 g4134 i0 78.9 1.96551724137931 76 16 98.3 0 230 3 38 113 MBC7741172.1 ABC transporter permease subunit [Bdellovibrio sp.] diamond 456 124 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
30664658 30664658 PRJEB11523_P_NODE_5413_length_200_cov_2.132450_g5335_i0 PRJEB11523 5413 200 2.13245 4.2649 Bdellovibrio sp. HCB274 3394361 Bacteria Bacteria 62.8 1.01e-10   NR WP_413584657.1 3394361 g5335 i0 74.4 0.585 39 10 58.5 0 200 84 58 96 WP_413584657.1 hypothetical protein [Bdellovibrio sp. HCB274] diamond 117 62.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB274
30822629 30822629 PRJEB11523_P_NODE_2394_length_340_cov_39.257732_g2316_i0 PRJEB11523 2394 340 39.257732 133.4762888 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 162 3.89e-47   NR MFN8370375.1 2081706 g2316 i0 90.1 0.714705882352941 81 8 71.5 0 244 2 1 81 MFN8370375.1 SPASM domain-containing protein [Bacteriovoracaceae bacterium] diamond 243 162 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
31360110 31360110 PRJEB11523_P_NODE_6296_length_184_cov_1.518519_g6218_i0 PRJEB11523 6296 184 1.518519 2.79407496 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 77 1.34e-14   NR MBX7231652.1 2053517 g6218 i0 58.3 0.978260869565217 60 25 97.8 0 3 182 300 359 MBX7231652.1 DUF4153 domain-containing protein [Bdellovibrionales bacterium] diamond 180 77 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31707827 31707827 PRJEB11523_P_NODE_4217_length_232_cov_11.967213_g4139_i0 PRJEB11523 4217 232 11.967213 27.76393416 Bdellovibrionia bacterium 3034169 Bacteria Bacteria 100 5.77e-23   NR MEQ1876290.1 3034169 g4139 i0 64.9 0.956896551724138 74 26 95.7 0 7 228 227 300 MEQ1876290.1 inner-membrane translocator [Bdellovibrionia bacterium] diamond 222 100 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia       Bdellovibrionia bacterium
31739307 31739307 PRJEB11523_P_NODE_4617_length_219_cov_3.347059_g4539_i0 PRJEB11523 4617 219 3.347059 7.33005921 Bdellovibrio sp. qaytius 1916293 Bacteria Bacteria 143 6.25e-40   NR AZZ35809.1 1916293 g4539 i0 92.5 2.75342465753425 67 5 91.8 0 201 1 146 212 AZZ35809.1 hypothetical protein CIK05_03000 [Bdellovibrio sp. qaytius] diamond 603 143 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. qaytius
32870898 32870898 PRJEB11523_P_NODE_1840_length_407_cov_21.153631_g1762_i0 PRJEB11523 1840 407 21.153631 86.09527817 Pseudomonadati 3379134 Bacteria Bacteria 128 1.19e-33   NR MCB0319140.1 2053517 g1762 i0 48.4 2.77886977886978 128 65 93.6 1 1 381 107 234 MCB0319140.1 prolipoprotein diacylglyceryl transferase [Bdellovibrionales bacterium] diamond 1131 128 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;