RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11523" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJEB11523 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26969367 26969367 PRJEB11523_P_NODE_6322_length_183_cov_16.231343_g6244_i0 PRJEB11523 6322 183 16.231343 29.70335769 Nitrososphaerota archaeon 2026795 Archaea Archaea 74.7 7.96e-14   NR MCH7560681.1 2026795 g6244 i0 62.3 0.868852459016393 53 20 86.9 0 25 183 329 381 MCH7560681.1 ParB N-terminal domain-containing protein [Nitrososphaerota archaeon] diamond 159 74.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29906543 29906543 PRJEB11523_P_NODE_5991_length_189_cov_1.457143_g5913_i0 PRJEB11523 5991 189 1.457143 2.75400027 Nitrososphaera sp. AFS 2301191 Archaea Archaea 66.2 5.73e-11   NR WP_201449407.1 2301191 g5913 i0 57.4 0.857142857142857 54 22 84.1 1 31 189 34 87 WP_201449407.1 hypothetical protein [Nitrososphaera sp. AFS] diamond 162 66.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp. AFS
30222250 30222250 PRJEB11523_P_NODE_5392_length_200_cov_13.019868_g5314_i0 PRJEB11523 5392 200 13.019868 26.039736 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 85.9 5.99e-20   NR HSE99786.1 2169593 g5314 i0 66.7 0.855 57 19 85.5 0 176 6 25 81 HSE99786.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 171 85.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;