RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJEB11523" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJEB11523 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28895849 28895849 PRJEB11523_P_NODE_248_length_1187_cov_2.616872_g210_i0 PRJEB11523 248 1187 2.616872 31.06227064 Grapevine wood holobiome associated deltaflexivirus 2 3384488 Viruses Viruses 54.7 1.15e-4   NR XLE34830.1 3384488 g210 i0 33 0.290648694187026 115 68 28.1 2 745 1077 62 171 XLE34830.1 hypothetical protein [Grapevine wood holobiome associated deltaflexivirus 2] diamond 345 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Grapevine wood holobiome associated deltaflexivirus 2
29811509 29811509 PRJEB11523_P_NODE_11_length_2927_cov_66.628909_g10_i0 PRJEB11523 11 2927 66.628909 1950.22816643 Leptinotarsa iflavirus 1 3079816 Viruses Viruses 693 7.83e-216   NR WNV56445.1 3079816 g10 i0 46.5 0.785104202254868 766 393 77.6 9 440 2710 2291 3048 WNV56445.1 MAG: polyprotein [Leptinotarsa iflavirus 1] diamond 2298 693 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Leptinotarsa iflavirus 1
31834186 31834186 PRJEB11523_P_NODE_2037_length_381_cov_9.876506_g1959_i0 PRJEB11523 2037 381 9.876506 37.62948786 Botourmiaviridae sp. 2808997 Viruses Viruses 117 1.08e-27   NR WAK77884.1 2808997 g1959 i0 68.6 0.677165354330709 86 27 67.7 0 123 380 8 93 WAK77884.1 MAG: RNA-dependent RNA polymerase [Botourmiaviridae sp.] diamond 258 117 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;