RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJEB10320" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB10320 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17865271 17865271 PRJEB10320_P_NODE_13415_length_255_cov_1.818182_g13157_i0 PRJEB10320 13415 255 1.818182 4.6363641 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 142 1.12e-39   NR ADK26624.1 323453 g13157 i0 78.3 0.976470588235294 83 18 97.6 0 6 254 121 203 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 249 142 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
29716631 29716631 PRJEB10320_P_NODE_26890_length_156_cov_1.322314_g26632_i0 PRJEB10320 26890 156 1.322314 2.06280984 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 92.8 3.4800000000000006e-21   NR ADK26624.1 323453 g26632 i0 82.7 1 52 9 100 0 156 1 136 187 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 156 92.8 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
30601338 30601338 PRJEB10320_P_NODE_7173_length_383_cov_2.364943_g6918_i0 PRJEB10320 7173 383 2.364943 9.05773169 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 148 2.48e-41   NR MES1907458.1 1215613 g6918 i0 67.9 0.830287206266319 106 34 83 0 64 381 4 109 MES1907458.1 hypothetical protein [Cercozoa sp. M6MM] diamond 318 148 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32055755 32055755 PRJEB10320_P_NODE_10758_length_295_cov_10.257692_g10500_i0 PRJEB10320 10758 295 10.257692 30.2601914 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 84.3 1.62e-18   NR MES1912234.1 1215613 g10500 i0 54.7 1.52542372881356 75 31 76.3 2 276 52 49 120 MES1912234.1 hypothetical protein [Cercozoa sp. M6MM] diamond 450 84.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;