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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJEB10320" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJEB10320 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26747439 26747439 PRJEB10320_P_NODE_24361_length_167_cov_1.356061_g24103_i0 PRJEB10320 24361 167 1.356061 2.26462187 uncultured Nocardioidaceae bacterium 253824 Bacteria Bacteria 38.9 0.0425   NR CAA9360326.1 253824 g24103 i0 56.3 0.574850299401198 32 13 57.5 1 114 19 1 31 CAA9360326.1 MAG: hypothetical protein AVDCRST_MAG72-2196, partial [uncultured Nocardioidaceae bacterium] diamond 96 38.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae   uncultured Nocardioidaceae bacterium
27853994 27853994 PRJEB10320_P_NODE_16325_length_222_cov_1.497326_g16067_i0 PRJEB10320 16325 222 1.497326 3.32406372 Geodermatophilus sp. 52020 Bacteria Bacteria 47.8 4.88e-4   NR HEX2076009.1 52020 g16067 i0 40.3 0.905405405405405 67 34 86.5 2 192 1 6 69 HEX2076009.1 nucleotide sugar dehydrogenase [Geodermatophilus sp.] diamond 201 47.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Geodermatophilales Geodermatophilaceae Geodermatophilus Geodermatophilus sp.
28074950 28074950 PRJEB10320_P_NODE_25985_length_159_cov_2.822581_g25727_i0 PRJEB10320 25985 159 2.822581 4.48790379 Actinomycetes bacterium 1883427 Bacteria Bacteria 64.7 6.51e-11   NR MEI6230221.1 1883427 g25727 i0 60 0.943396226415094 50 20 94.3 0 151 2 24 73 MEI6230221.1 NAD(P)H-dependent oxidoreductase [Actinomycetes bacterium] diamond 150 64.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes       Actinomycetes bacterium
28138437 28138437 PRJEB10320_P_NODE_13345_length_256_cov_1.760181_g13087_i0 PRJEB10320 13345 256 1.760181 4.50606336 Streptomyces sp. NPDC 1931 Bacteria Bacteria 43.9 0.0172   NR WP_403467419.1 3366069 g13087 i0 36.1 0.84375 72 44 84.4 2 224 9 119 188 WP_403467419.1 SAV_2336 N-terminal domain-related protein [Streptomyces sp. NPDC096013] diamond 216 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC096013
28138439 28138439 PRJEB10320_P_NODE_15705_length_228_cov_1.621762_g15447_i0 PRJEB10320 15705 228 1.621762 3.69761736 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 53.1 6.13e-6   NR HEY3828221.1 2586742 g15447 i0 47.3 0.723684210526316 55 29 72.4 0 14 178 250 304 HEY3828221.1 hypothetical protein [Solirubrobacteraceae bacterium] diamond 165 53.1 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
28574077 28574077 PRJEB10320_P_NODE_23427_length_172_cov_0.948905_g23169_i0 PRJEB10320 23427 172 0.948905 1.6321166 Bacillati 1783272 Bacteria Bacteria 52.8 3.95e-6   NR WP_103464117.1 1664 g23169 i0 48.3 7.06395348837209 60 28 99.4 2 1 171 13 72 WP_103464117.1 NADP-dependent oxidoreductase [Arthrobacter glacialis] diamond 1215 53.1 0.994350282485876 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Arthrobacter Arthrobacter glacialis
28700533 28700533 PRJEB10320_P_NODE_20387_length_190_cov_1.490323_g20129_i0 PRJEB10320 20387 190 1.490323 2.8316137 root 1 Root_unresolved Root_unresolved 87.8 9.06e-19   NR MCB0967962.1 1967498 g20129 i0 70.3 3 64 18 99.5 1 2 190 17 80 MCB0967962.1 phosphopyruvate hydratase [Ilumatobacter sp.] diamond 570 87.8 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales Ilumatobacteraceae Ilumatobacter Ilumatobacter sp.
28706631 28706631 PRJEB10320_P_NODE_1087_length_980_cov_8.831746_g959_i0 PRJEB10320 1087 980 8.831746 86.5511108 Actinomycetota bacterium 2900548 Bacteria Bacteria 188 7.519999999999999e-55   NR MEN9305899.1 2900548 g959 i0 45.9 1.22755102040816 205 111 62.8 0 898 284 4 208 MEN9305899.1 hypothetical protein [Actinomycetota bacterium] diamond 1203 188 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
28921297 28921297 PRJEB10320_P_NODE_10348_length_303_cov_2.085821_g10090_i0 PRJEB10320 10348 303 2.085821 6.32003763 Nocardioides 1839 Bacteria Bacteria 47.4 0.00171   NR WP_121258262.1 2340821 g10090 i0 65.5 4.96039603960396 29 10 28.7 0 303 217 340 368 WP_121258262.1 adenosine deaminase [Nocardioides ferulae] diamond 1503 47.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Nocardioides Nocardioides ferulae
29401133 29401133 PRJEB10320_P_NODE_20509_length_189_cov_1.558442_g20251_i0 PRJEB10320 20509 189 1.558442 2.94545538 Streptomyces sp. NPDC 1931 Bacteria Bacteria 47 5.7e-4   NR WP_398271230.1 3365114 g20251 i0 47.1 1.79365079365079 51 25 81 2 36 188 436 484 WP_398271230.1 alpha/beta fold hydrolase [Streptomyces sp. NPDC021100] diamond 339 47 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC021100
29432446 29432446 PRJEB10320_P_NODE_23330_length_172_cov_1.671533_g23072_i0 PRJEB10320 23330 172 1.671533 2.87503676 Microbacteriaceae bacterium 1873462 Bacteria Bacteria 45.4 0.00106   NR MBX9717868.1 1873462 g23072 i0 43.9 0.715116279069767 41 23 71.5 0 163 41 1 41 MBX9717868.1 hypothetical protein [Microbacteriaceae bacterium] diamond 123 45.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   Microbacteriaceae bacterium
29527539 29527539 PRJEB10320_P_NODE_9370_length_323_cov_1.864583_g9112_i0 PRJEB10320 9370 323 1.864583 6.02260309 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 105 5.879999999999999e-24   NR MBJ7244123.1 2586742 g9112 i0 51.9 1.0030959752322 108 47 95.7 2 15 323 256 363 MBJ7244123.1 hypothetical protein [Solirubrobacteraceae bacterium] diamond 324 105 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
30001321 30001321 PRJEB10320_P_NODE_5471_length_452_cov_1.580336_g5222_i0 PRJEB10320 5471 452 1.580336 7.14311872 Streptomyces sp. WAC 1931 Bacteria Bacteria 47.4 0.00685   NR WP_125531022.1 2203209 g5222 i0 35.5 0.411504424778761 62 36 38.5 1 252 425 285 346 WP_125531022.1 hypothetical protein [Streptomyces sp. WAC 06725] diamond 186 47.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. WAC 06725
30089717 30089717 PRJEB10320_P_NODE_26892_length_156_cov_1.322314_g26634_i0 PRJEB10320 26892 156 1.322314 2.06280984 Actinomycetes 1760 Bacteria Bacteria 46.6 5e-4   NR NUP53185.1 1962977 g26634 i0 55.8 4.23076923076923 43 17 80.8 2 22 147 207 248 NUP53185.1 RICIN domain-containing protein [Catenulispora sp.] diamond 660 47 0.991489361702128 Bacteria   Bacillati Actinomycetota Actinomycetes Catenulisporales Catenulisporaceae Catenulispora Catenulispora sp.
30222226 30222226 PRJEB10320_P_NODE_10372_length_303_cov_1.507463_g10114_i0 PRJEB10320 10372 303 1.507463 4.56761289 Streptomyces sp. NPDC 1931 Bacteria Bacteria 67.4 1.49e-10   NR WP_393627803.1 3365591 g10114 i0 41 4.9009900990099 100 52 97 4 1 294 52 146 WP_393627803.1 hypothetical protein [Streptomyces sp. NPDC048751] diamond 1485 67.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC048751
30343126 30343126 PRJEB10320_P_NODE_9992_length_310_cov_2.454545_g9734_i0 PRJEB10320 9992 310 2.454545 7.6090895 Actinomycetes 1760 Bacteria Bacteria 74.3 1.54e-13   NR WP_357498869.1 3155642 g9734 i0 46.6 2.99032258064516 103 46 97.7 3 309 7 82 177 WP_357498869.1 SDR family oxidoreductase [Phytomonospora sp. NPDC050363] diamond 927 74.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Phytomonospora Phytomonospora sp. NPDC050363
30469248 30469248 PRJEB10320_P_NODE_9593_length_318_cov_2.522968_g9335_i0 PRJEB10320 9593 318 2.522968 8.02303824 Bacteria 2 Bacteria Bacteria 99 3.2799999999999995e-23   NR MEI6230221.1 1883427 g9335 i0 54.8 2.63207547169811 93 42 87.7 0 38 316 1 93 MEI6230221.1 NAD(P)H-dependent oxidoreductase [Actinomycetes bacterium] diamond 837 99 1 Bacteria   Bacillati Actinomycetota Actinomycetes       Actinomycetes bacterium
30791037 30791037 PRJEB10320_P_NODE_6254_length_417_cov_1.431937_g6002_i0 PRJEB10320 6254 417 1.431937 5.97117729 Microbacteriaceae bacterium 1873462 Bacteria Bacteria 52 5.21e-5   NR MBX9717868.1 1873462 g6002 i0 36.2 0.496402877697842 69 39 46 1 98 289 1 69 MBX9717868.1 hypothetical protein [Microbacteriaceae bacterium] diamond 207 52 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   Microbacteriaceae bacterium
30854160 30854160 PRJEB10320_P_NODE_22114_length_179_cov_1.666667_g21856_i0 PRJEB10320 22114 179 1.666667 2.98333393 Nocardioides sp. SR21 2919501 Bacteria Bacteria 45.4 0.0014   NR WP_243059513.1 2919501 g21856 i0 42.4 0.988826815642458 59 34 98.9 0 3 179 132 190 WP_243059513.1 fasciclin domain-containing protein [Nocardioides sp. SR21] diamond 177 45.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Nocardioides Nocardioides sp. SR21
31075500 31075500 PRJEB10320_P_NODE_17115_length_215_cov_1.416667_g16857_i0 PRJEB10320 17115 215 1.416667 3.04583405 unclassified Kitasatospora 2633591 Bacteria Bacteria 51.2 2.59e-5   NR WP_280670440.1 2633591 g16857 i0 63.2 1.25581395348837 38 14 53 0 101 214 304 341 WP_280670440.1 MULTISPECIES: cytochrome P450 [unclassified Kitasatospora] diamond 270 51.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Kitasatospora  
31075511 31075511 PRJEB10320_P_NODE_5215_length_463_cov_2.390187_g4968_i0 PRJEB10320 5215 463 2.390187 11.06656581 Microbacteriaceae bacterium 1873462 Bacteria Bacteria 58.5 1.49e-7   NR MBX9717869.1 1873462 g4968 i0 39.7 0.375809935205184 58 35 37.6 0 241 414 40 97 MBX9717869.1 hypothetical protein [Microbacteriaceae bacterium] diamond 174 58.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   Microbacteriaceae bacterium
31296614 31296614 PRJEB10320_P_NODE_4355_length_512_cov_3.029350_g4118_i0 PRJEB10320 4355 512 3.02935 15.510272 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 79.3 5.53e-14   NR HEV7885180.1 2586742 g4118 i0 35.5 0.708984375 121 76 69.7 1 83 439 189 309 HEV7885180.1 hypothetical protein [Solirubrobacteraceae bacterium] diamond 363 79.3 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
31328216 31328216 PRJEB10320_P_NODE_22256_length_178_cov_1.958042_g21998_i0 PRJEB10320 22256 178 1.958042 3.48531476 Streptomyces brasiliscabiei 2736302 Bacteria Bacteria 114 2.6199999999999996e-31   NR WP_336543739.1 2736302 g21998 i0 89.8 0.99438202247191 59 6 99.4 0 177 1 25 83 WP_336543739.1 hypothetical protein, partial [Streptomyces brasiliscabiei] diamond 177 114 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces brasiliscabiei
31360092 31360092 PRJEB10320_P_NODE_24096_length_168_cov_1.699248_g23838_i0 PRJEB10320 24096 168 1.699248 2.85473664 Curtobacterium sp. MCJR17_ 1869344 Bacteria Bacteria 53.1 4.6e-7   NR WP_220036419.1 2175619 g23838 i0 62.8 0.767857142857143 43 15 76.8 1 129 1 4 45 WP_220036419.1 SDR family NAD(P)-dependent oxidoreductase [Curtobacterium sp. MCJR17_020] diamond 129 53.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Curtobacterium Curtobacterium sp. MCJR17_020
31676086 31676086 PRJEB10320_P_NODE_24837_length_165_cov_1.223077_g24579_i0 PRJEB10320 24837 165 1.223077 2.01807705 Lentzea pudingi 1789439 Bacteria Bacteria 47 4e-4   NR WP_189160793.1 1789439 g24579 i0 69 0.763636363636364 42 11 76.4 1 127 2 2 41 WP_189160793.1 NAD-dependent epimerase/dehydratase family protein [Lentzea pudingi] diamond 126 47 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Lentzea Lentzea pudingi
31960866 31960866 PRJEB10320_P_NODE_27598_length_153_cov_2.033898_g27340_i0 PRJEB10320 27598 153 2.033898 3.11186394 Streptomyces sp. LN785 3112983 Bacteria Bacteria 50.4 2.12e-5   NR WP_392673674.1 3112983 g27340 i0 48.1 2.05882352941176 52 23 94.1 1 7 150 476 527 WP_392673674.1 CocE/NonD family hydrolase [Streptomyces sp. LN785] diamond 315 50.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. LN785
31992531 31992531 PRJEB10320_P_NODE_18938_length_200_cov_1.454545_g18680_i0 PRJEB10320 18938 200 1.454545 2.90909 Actinomycetota bacterium 2900548 Bacteria Bacteria 75.9 6.21e-15   NR MEY2634385.1 2900548 g18680 i0 69.5 0.885 59 18 88.5 0 2 178 150 208 MEY2634385.1 hypothetical protein [Actinomycetota bacterium] diamond 177 75.9 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
32024272 32024272 PRJEB10320_P_NODE_12518_length_267_cov_1.698276_g12260_i0 PRJEB10320 12518 267 1.698276 4.53439692 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 57.4 3.21e-7   NR HEV7885180.1 2586742 g12260 i0 42.4 0.662921348314607 59 34 66.3 0 180 4 207 265 HEV7885180.1 hypothetical protein [Solirubrobacteraceae bacterium] diamond 177 57.4 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
32087477 32087477 PRJEB10320_P_NODE_1738_length_805_cov_16.214286_g1570_i0 PRJEB10320 1738 805 16.214286 130.5250023 Actinomycetota bacterium 2900548 Bacteria Bacteria 236 1.45e-74   NR MEY2634385.1 2900548 g1570 i0 58.9 2.31428571428571 207 85 77.1 0 733 113 1 207 MEY2634385.1 hypothetical protein [Actinomycetota bacterium] diamond 1863 236 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
32467449 32467449 PRJEB10320_P_NODE_28379_length_151_cov_1.034483_g28121_i0 PRJEB10320 28379 151 1.034483 1.56206933 Actinomycetota bacterium 2900548 Bacteria Bacteria 50.8 1.39e-5   NR MEC8392495.1 2900548 g28121 i0 50 0.993377483443709 50 25 99.3 0 151 2 183 232 MEC8392495.1 hypothetical protein [Actinomycetota bacterium] diamond 150 50.8 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
32499031 32499031 PRJEB10320_P_NODE_13219_length_258_cov_1.139013_g12961_i0 PRJEB10320 13219 258 1.139013 2.93865354 Streptomyces antibioticus 1890 Bacteria Bacteria 42.7 0.0431   NR WP_205070119.1 1890 g12961 i0 33.3 0.906976744186046 78 50 90.7 2 11 244 61 136 WP_205070119.1 cation:proton antiporter [Streptomyces antibioticus] diamond 234 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces antibioticus
32776353 32776353 PRJEB10320_P_NODE_19340_length_197_cov_1.969136_g19082_i0 PRJEB10320 19340 197 1.969136 3.87919792 Streptomyces 1883 Bacteria Bacteria 62.4 1.91e-9   NR WP_274912208.1 2593676 g19082 i0 53.2 8.2994923857868 62 28 94.4 1 9 194 65 125 WP_274912208.1 MULTISPECIES: phosphatidylinositol-specific phospholipase C [unclassified Streptomyces] diamond 1635 62.8 0.993630573248408 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces  
32813949 32813949 PRJEB10320_P_NODE_11420_length_284_cov_1.943775_g11162_i0 PRJEB10320 11420 284 1.943775 5.520321 Nocardioides sp. 35761 Bacteria Bacteria 48.9 8.14e-5   NR HET6940133.1 35761 g11162 i0 32.2 3.57042253521127 87 54 91.9 1 4 264 14 95 HET6940133.1 DUF4267 domain-containing protein [Nocardioides sp.] diamond 1014 48.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Nocardioides Nocardioides sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;