RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJDB9741" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4809760 4809760 PRJDB9741_P_NODE_304_length_1585_cov_3.732422_g208_i0 PRJDB9741 304 1585 3.732422 59.1588887 Chthoniobacter sp. 2510640 Bacteria Bacteria 844 2.88e-305   NR MDR3405335.1 2510640 g208 i0 88.6 0.878233438485804 464 53 87.8 0 61 1452 1 464 MDR3405335.1 translation elongation factor EF1A family protein [Chthoniobacter sp.] diamond 1392 844 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
27221947 27221947 PRJDB9741_P_NODE_20083_length_178_cov_1.193798_g19766_i0 PRJDB9741 20083 178 1.193798 2.12496044 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 62 2.42e-9   NR HEV7404525.1 2811408 g19766 i0 55.2 0.97752808988764 58 26 97.8 0 176 3 586 643 HEV7404525.1 DUF1549 domain-containing protein [Chthoniobacteraceae bacterium] diamond 174 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
27790797 27790797 PRJDB9741_P_NODE_26904_length_167_cov_2.050847_g26587_i0 PRJDB9741 26904 167 2.050847 3.42491449 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 51.6 9.9e-6   NR MBK8092153.1 2026800 g26587 i0 87.1 0.55688622754491 31 4 55.7 0 75 167 630 660 MBK8092153.1 protein kinase [Verrucomicrobiaceae bacterium] diamond 93 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28864130 28864130 PRJDB9741_P_NODE_42428_length_154_cov_3.523810_g42111_i0 PRJDB9741 42428 154 3.52381 5.4266674 Opitutaceae bacterium 2006848 Bacteria Bacteria 40.4 0.0342   NR HEX3730387.1 2006848 g42111 i0 34.7 0.954545454545455 49 31 95.5 1 8 154 8 55 HEX3730387.1 hypothetical protein [Opitutaceae bacterium] diamond 147 40.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
29053760 29053760 PRJDB9741_P_NODE_13848_length_189_cov_1.107143_g13531_i0 PRJDB9741 13848 189 1.107143 2.09250027 Opitutus sp. 1913982 Bacteria Bacteria 43.9 0.00709   NR MBA3849253.1 1913982 g13531 i0 40.7 2.73015873015873 59 35 93.7 0 179 3 325 383 MBA3849253.1 sugar tyrosine-protein kinase [Opitutus sp.] diamond 516 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
30506522 30506522 PRJDB9741_P_NODE_30553_length_166_cov_0.871795_g30236_i0 PRJDB9741 30553 166 0.871795 1.4471797 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 75.1 2.62e-14   NR MEN9402104.1 2026799 g30236 i0 69.8 1.8433734939759 53 16 95.8 0 161 3 147 199 MEN9402104.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 306 75.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31169729 31169729 PRJDB9741_P_NODE_27595_length_167_cov_0.864407_g27278_i0 PRJDB9741 27595 167 0.864407 1.44355969 Opitutaceae bacterium 2006848 Bacteria Bacteria 50.1 3.45e-5   NR HUL54344.1 2006848 g27278 i0 70.4 0.48502994011976 27 8 48.5 0 85 165 8 34 HUL54344.1 phosphoenolpyruvate carboxykinase (GTP) [Opitutaceae bacterium] diamond 81 50.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32119056 32119056 PRJDB9741_P_NODE_19518_length_179_cov_1.176923_g19201_i0 PRJDB9741 19518 179 1.176923 2.10669217 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 92.4 1.34e-20   NR HUR41831.1 2499141 g19201 i0 78 4.94413407821229 59 13 98.9 0 1 177 214 272 HUR41831.1 malate dehydrogenase [Verrucomicrobiia bacterium] diamond 885 92.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32213926 32213926 PRJDB9741_P_NODE_25318_length_170_cov_1.247934_g25001_i0 PRJDB9741 25318 170 1.247934 2.1214878 Opitutaceae bacterium 2006848 Bacteria Bacteria 87 3.41e-18   NR MCE2862490.1 2006848 g25001 i0 69.8 2.82352941176471 53 16 93.5 0 6 164 242 294 MCE2862490.1 sialate O-acetylesterase [Opitutaceae bacterium] diamond 480 87 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;