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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJDB9741" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 26 ✖

analysis 1

  • diamond · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5113331 5113331 PRJDB9741_P_NODE_31325_length_165_cov_1.396552_g31008_i0 PRJDB9741 31325 165 1.396552 2.3043108 Anura 8342 Chordata Chordata 99 1.3e-22   NR XP_069613570.1 111125 g31008 i0 85.5 4.96363636363636 55 8 100 0 165 1 185 239 XP_069613570.1 beta-ureidopropionase [Ranitomeya imitator] diamond 819 99 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
20108417 20108417 PRJDB9741_P_NODE_5256_length_276_cov_1.123348_g4940_i0 PRJDB9741 5256 276 1.123348 3.10044048 Metazoa 33208 Chordata Chordata 128 2.44e-34   NR XP_049994965.1 100897 g4940 i0 68.9 15.6521739130435 90 28 97.8 0 5 274 162 251 XP_049994965.1 60S ribosomal protein L23a-like [Alexandromys fortis] diamond 4320 129 0.992248062015504 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Alexandromys Alexandromys fortis
22962783 22962783 PRJDB9741_P_NODE_2239_length_499_cov_3.713333_g1926_i0 PRJDB9741 2239 499 3.713333 18.52953167 Opisthokonta 33154 Chordata Chordata 81.6 1.21e-16   NR CAG5105596.1 34765 g1926 i0 69.1 3.66132264529058 110 34 66.1 0 460 131 1 110 CAG5105596.1 Oidioi.mRNA.OKI2018_I69.chr1.g2273.t1.cds [Oikopleura dioica] diamond 1827 81.6 1 Eukaryota Opisthokonta Metazoa Chordata Appendicularia Copelata Oikopleuridae Oikopleura Oikopleura dioica
26741269 26741269 PRJDB9741_P_NODE_2581_length_455_cov_2.000000_g2267_i0 PRJDB9741 2581 455 2 9.1 Chordata 7711 Chordata Chordata 192 1.11e-59   NR KAK9406484.1 8729 g2267 i0 67.1 75.2307692307692 146 44 94.3 2 430 2 38 182 KAK9406484.1 hypothetical protein NXF25_005258 [Crotalus adamanteus] diamond 34230 193 0.994818652849741 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Crotalus Crotalus adamanteus
26868549 26868549 PRJDB9741_P_NODE_15441_length_186_cov_1.248175_g15124_i0 PRJDB9741 15441 186 1.248175 2.3216055 Chordata 7711 Chordata Chordata 48.1 2.11e-4   NR NP_001407367.1 10090 g15124 i0 69 4.20967741935484 29 9 46.8 0 3 89 369 397 NP_001407367.1 cysteine desulfurase isoform 2 [Mus musculus] diamond 783 48.5 0.991752577319588 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
27784940 27784940 PRJDB9741_P_NODE_8684_length_214_cov_2.551515_g8367_i0 PRJDB9741 8684 214 2.551515 5.4602421 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.9 3.46e-16   NR NP_001085135.1 8355 g8367 i0 77.8 61.4439252336449 45 10 63.1 0 213 79 254 298 NP_001085135.1 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 L homeolog [Xenopus laevis] diamond 13149 81.3 0.995079950799508 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
28864123 28864123 PRJDB9741_P_NODE_24988_length_170_cov_1.685950_g24671_i0 PRJDB9741 24988 170 1.68595 2.866115 Suncus etruscus 109475 Chordata Chordata 50.8 3.8e-6   NR XP_049637858.1 109475 g24671 i0 60.6 0.582352941176471 33 13 58.2 0 169 71 88 120 XP_049637858.1 60S ribosomal protein L22-like 1 [Suncus etruscus] diamond 99 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Soricidae Suncus Suncus etruscus
28984810 28984810 PRJDB9741_P_NODE_34448_length_164_cov_0.886957_g34131_i0 PRJDB9741 34448 164 0.886957 1.45460948 Branchiostoma 7737 Chordata Chordata 95.9 1.5e-21   NR CAH1231397.1 7740 g34131 i0 81.5 1.97560975609756 54 10 98.8 0 2 163 28 81 CAH1231397.1 Hypp381 [Branchiostoma lanceolatum] diamond 324 95.9 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma lanceolatum
29022446 29022446 PRJDB9741_P_NODE_24708_length_170_cov_2.619835_g24391_i0 PRJDB9741 24708 170 2.619835 4.4537195 Nyctereutes procyonoides 34880 Chordata Chordata 67.8 2.02e-11   NR CAD7692971.1 34880 g24391 i0 67.3 0.970588235294118 55 18 97.1 0 165 1 28 82 CAD7692971.1 unnamed protein product [Nyctereutes procyonoides] diamond 165 67.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Nyctereutes Nyctereutes procyonoides
29426382 29426382 PRJDB9741_P_NODE_37049_length_162_cov_1.787611_g36732_i0 PRJDB9741 37049 162 1.787611 2.89592982 Metazoa 33208 Chordata Chordata 80.1 4.06e-16   NR XP_019633086.1 7741 g36732 i0 66 11.9259259259259 50 17 92.6 0 153 4 260 309 XP_019633086.1 PREDICTED: deoxyribose-phosphate aldolase-like [Branchiostoma belcheri] diamond 1932 80.1 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
29621485 29621485 PRJDB9741_P_NODE_27530_length_167_cov_0.864407_g27213_i0 PRJDB9741 27530 167 0.864407 1.44355969 Staurois parvus 386267 Chordata Chordata 66.2 2.25e-12   NR CAI9547784.1 386267 g27213 i0 66.7 1.38323353293413 39 13 70.1 0 51 167 5 43 CAI9547784.1 unnamed protein product, partial [Staurois parvus] diamond 231 66.2 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
30190423 30190423 PRJDB9741_P_NODE_7732_length_226_cov_1.440678_g7415_i0 PRJDB9741 7732 226 1.440678 3.25593228 Branchiostoma lanceolatum 7740 Chordata Chordata 44.3 0.00707   NR XP_066287101.1 7740 g7415 i0 32 1.35398230088496 75 41 99.6 2 225 1 43 107 XP_066287101.1 large ribosomal subunit protein uL6-like [Branchiostoma lanceolatum] diamond 306 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma lanceolatum
30695943 30695943 PRJDB9741_P_NODE_30354_length_166_cov_0.871795_g30037_i0 PRJDB9741 30354 166 0.871795 1.4471797 Rhineura floridana 261503 Chordata Chordata 65.1 1.73e-10   NR XP_061493005.1 261503 g30037 i0 50.9 16.8975903614458 55 27 99.4 0 2 166 302 356 XP_061493005.1 eukaryotic translation initiation factor 2A isoform X1 [Rhineura floridana] diamond 2805 65.1 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Rhineuridae Rhineura Rhineura floridana
30879580 30879580 PRJDB9741_P_NODE_18974_length_180_cov_1.167939_g18657_i0 PRJDB9741 18974 180 1.167939 2.1022902 Metazoa 33208 Chordata Chordata 75.9 1.74e-15   NR XP_005994162.2 7897 g18657 i0 68.6 20.15 51 16 85 0 28 180 20 70 XP_005994162.2 small ribosomal subunit protein eS17 [Latimeria chalumnae] diamond 3627 75.9 1 Eukaryota Opisthokonta Metazoa Chordata   Coelacanthiformes Coelacanthidae Latimeria Latimeria chalumnae
31201142 31201142 PRJDB9741_P_NODE_7375_length_231_cov_1.379121_g7058_i0 PRJDB9741 7375 231 1.379121 3.18576951 Engystomops pustulosus 76066 Chordata Chordata 48.1 4.17e-4   NR KAG8571490.1 76066 g7058 i0 61.8 8.83116883116883 34 13 44.2 0 102 1 982 1015 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 2040 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
31232994 31232994 PRJDB9741_P_NODE_23035_length_173_cov_1.459677_g22718_i0 PRJDB9741 23035 173 1.459677 2.52524121 Branchiostoma belcheri 7741 Chordata Chordata 57 1.36e-7   NR XP_019618294.1 7741 g22718 i0 46.4 0.971098265895954 56 30 97.1 0 1 168 1113 1168 XP_019618294.1 PREDICTED: ATP-binding cassette sub-family A member 1-like [Branchiostoma belcheri] diamond 168 57 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
31296372 31296372 PRJDB9741_P_NODE_10735_length_201_cov_2.013158_g10418_i0 PRJDB9741 10735 201 2.013158 4.04644758 Branchiostoma floridae 7739 Chordata Chordata 42.4 0.0221   NR XP_035674994.1 7739 g10418 i0 62.5 1.65671641791045 24 9 35.8 0 12 83 167 190 XP_035674994.1 tubulin alpha-1 chain-like [Branchiostoma floridae] diamond 333 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma floridae
31417007 31417007 PRJDB9741_P_NODE_40956_length_160_cov_2.279279_g40639_i0 PRJDB9741 40956 160 2.279279 3.6468464 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 2.64e-6   NR OXB70831.1 9014 g40639 i0 44 1.8375 50 28 93.8 0 158 9 65 114 OXB70831.1 hypothetical protein H355_002510 [Colinus virginianus] diamond 294 53.1 0.994350282485876 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Odontophoridae Colinus Colinus virginianus
31486441 31486441 PRJDB9741_P_NODE_18196_length_181_cov_1.530303_g17879_i0 PRJDB9741 18196 181 1.530303 2.76984843 Erinaceus europaeus 9365 Chordata Chordata 72.8 2.08e-14   NR XP_060035059.1 9365 g17879 i0 69.6 0.76243093922651906 46 14 76.2 0 152 15 24 69 XP_060035059.1 microsomal glutathione S-transferase 2 [Erinaceus europaeus] diamond 138 72.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Erinaceidae Erinaceus Erinaceus europaeus
31543595 31543595 PRJDB9741_P_NODE_4936_length_287_cov_1.907563_g4620_i0 PRJDB9741 4936 287 1.907563 5.47470581 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 64.3 7.56e-10   NR XP_019641702.1 7741 g4620 i0 42.2 4.74564459930314 90 52 94.1 0 276 7 12 101 XP_019641702.1 PREDICTED: 60S ribosomal protein L7-like [Branchiostoma belcheri] diamond 1362 64.7 0.993817619783617 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
31581271 31581271 PRJDB9741_P_NODE_42356_length_155_cov_2.207547_g42039_i0 PRJDB9741 42356 155 2.207547 3.42169785 Mus musculus 10090 Chordata Chordata 107 1.62e-25   NR NP_001165572.1 10090 g42039 i0 100 0.987096774193548 51 0 98.7 0 2 154 336 386 NP_001165572.1 ribonuclease inhibitor isoform b [Mus musculus] diamond 153 107 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
31764889 31764889 PRJDB9741_P_NODE_33357_length_164_cov_1.382609_g33040_i0 PRJDB9741 33357 164 1.382609 2.26747876 Chordata 7711 Chordata Chordata 40 0.0323   NR XP_040261850.1 8384 g33040 i0 50 2.81707317073171 42 20 75 1 4 126 48 89 XP_040261850.1 selenoprotein W [Bufo bufo] diamond 462 40 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufo Bufo bufo
32524607 32524607 PRJDB9741_P_NODE_34979_length_163_cov_1.789474_g34662_i0 PRJDB9741 34979 163 1.789474 2.91684262 Anura 8342 Chordata Chordata 50.1 3.31e-5   NR XP_018418790.1 125878 g34662 i0 48 2.76073619631902 50 26 92 0 1 150 368 417 XP_018418790.1 PREDICTED: nucleolin isoform X4 [Nanorana parkeri] diamond 450 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dicroglossidae Nanorana Nanorana parkeri
32530460 32530460 PRJDB9741_P_NODE_17639_length_182_cov_1.473684_g17322_i0 PRJDB9741 17639 182 1.473684 2.68210488 Branchiostoma belcheri 7741 Chordata Chordata 91.7 9.68e-20   NR KAI8508850.1 7741 g17322 i0 67.2 7.5 58 19 95.6 0 3 176 692 749 KAI8508850.1 hypothetical protein Bbelb_139490 [Branchiostoma belcheri] diamond 1365 91.7 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
32587622 32587622 PRJDB9741_P_NODE_35599_length_163_cov_0.894737_g35282_i0 PRJDB9741 35599 163 0.894737 1.45842131 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.7 4.36e-5   NR XP_028561992.1 64176 g35282 i0 48 5.52147239263804 50 26 92 0 158 9 45 94 XP_028561992.1 protein unc-45 homolog A isoform X1 [Podarcis muralis] diamond 900 49.7 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Lacertidae Podarcis Podarcis muralis
32902184 32902184 PRJDB9741_P_NODE_18580_length_180_cov_2.083969_g18263_i0 PRJDB9741 18580 180 2.083969 3.7511442 Opisthokonta 33154 Chordata Chordata 108 1.74e-28   NR CBY33775.1 34765 g18263 i0 81.4 3.86666666666667 59 11 98.3 0 178 2 55 113 CBY33775.1 unnamed protein product [Oikopleura dioica] diamond 696 108 1 Eukaryota Opisthokonta Metazoa Chordata Appendicularia Copelata Oikopleuridae Oikopleura Oikopleura dioica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;