RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJDB9741" and tax_phylum = "Candidatus Fermentibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fermentibacterota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB9741 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26589038 26589038 PRJDB9741_P_NODE_36021_length_163_cov_0.894737_g35704_i0 PRJDB9741 36021 163 0.894737 1.45842131 Candidatus Fermentibacter sp. 2779163 Bacteria Bacteria 41.2 0.0435   NR MDM7992006.1 2779163 g35704 i0 42.9 0.901840490797546 49 28 90.2 0 155 9 584 632 MDM7992006.1 NAD-dependent DNA ligase LigA [Candidatus Fermentibacter sp.] diamond 147 41.2 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota Candidatus Fermentibacteria Candidatus Fermentibacterales Candidatus Fermentibacteraceae Candidatus Fermentibacter Candidatus Fermentibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;