RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJDB9741" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJDB9741 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28043296 28043296 PRJDB9741_P_NODE_6985_length_237_cov_1.994681_g6668_i0 PRJDB9741 6985 237 1.994681 4.72739397 ssRNA phage Gerhypos.1_36 2786219 Viruses Viruses 51.6 4.6e-6   NR YP_010770575.1 2786219 g6668 i0 43.9 1.67088607594937 66 36 83.5 1 13 210 1 65 YP_010770575.1 coat protein [ssRNA phage Gerhypos.1_36] diamond 396 51.6 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Steitzviridae Hodnevirus Hodnevirus neopedovicinum
28864119 28864119 PRJDB9741_P_NODE_1168_length_786_cov_1.875170_g909_i0 PRJDB9741 1168 786 1.87517 14.7388362 ssRNA phage SRR5467 2844986 Viruses Viruses 69.3 2.27e-9   NR YP_010770771.1 2786460 g909 i0 28.1 1.1412213740458 299 165 98.5 10 6 779 89 378 YP_010770771.1 maturation protein [ssRNA phage SRR5467091_10] diamond 897 69.3 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Steitzviridae Huylevirus Huylevirus limihabitans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;