RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJDB9741" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJDB9741 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27380402 27380402 PRJDB9741_P_NODE_15503_length_186_cov_1.160584_g15186_i0 PRJDB9741 15503 186 1.160584 2.15868624 Tupanvirus deep ocean 2126984 Viruses Viruses 55.8 1.75e-7   NR YP_010780883.1 2126984 g15186 i0 51.2 0.693548387096774 43 21 69.4 0 2 130 23 65 YP_010780883.1 rab family small GTPase [Tupanvirus deep ocean] diamond 129 55.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
30222035 30222035 PRJDB9741_P_NODE_37592_length_162_cov_0.902655_g37275_i0 PRJDB9741 37592 162 0.902655 1.4623011 Fadolivirus algeromassiliense 3060017 Viruses Viruses 62.8 1.03e-9   NR YP_010804182.1 3060017 g37275 i0 60.8 1.92592592592593 51 13 94.4 1 5 157 278 321 YP_010804182.1 putative D-alanine-D-alanine ligase [Fadolivirus algeromassiliense] diamond 312 62.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
31138074 31138074 PRJDB9741_P_NODE_40935_length_160_cov_2.342342_g40618_i0 PRJDB9741 40935 160 2.342342 3.7477472 Bodo saltans virus 2024608 Viruses Viruses 51.2 1.14e-5   NR YP_010778322.1 2024608 g40618 i0 46.2 0.975 52 28 97.5 0 160 5 141 192 YP_010778322.1 soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein [Bodo saltans virus] diamond 156 51.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;