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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJDB4941" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 12 ✖

tax_clade 1

bioproject 1

  • PRJDB4941 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28043256 28043256 PRJDB4941_P_NODE_17365_length_250_cov_0.985075_g16597_i0 PRJDB4941 17365 250 0.985075 2.4626875 Methanobacteriota archaeon 2026739 Archaea Archaea 49.3 1.95e-4   NR MBP05020.1 2026739 g16597 i0 41.5 0.636 53 31 63.6 0 213 55 239 291 MBP05020.1 hypothetical protein [Methanobacteriota archaeon] diamond 159 49.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28390520 28390520 PRJDB4941_P_NODE_14966_length_275_cov_0.889381_g14198_i0 PRJDB4941 14966 275 0.889381 2.44579775 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 48.1 2.1e-4   NR MEM4499747.1 2026803 g14198 i0 65.6 0.349090909090909 32 11 34.9 0 264 169 68 99 MEM4499747.1 30S ribosomal protein S19e [Candidatus Woesearchaeota archaeon] diamond 96 48.1 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
28637431 28637431 PRJDB4941_P_NODE_16707_length_256_cov_1.584541_g15939_i0 PRJDB4941 16707 256 1.584541 4.05642496 Archaea 2157 Archaea Archaea 41.2 0.0352   NR MEM2549776.1 2026795 g15939 i0 38.8 1.5703125 67 34 70.3 1 210 31 23 89 MEM2549776.1 hypothetical protein [Nitrososphaerota archaeon] diamond 402 41.2 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28763415 28763415 PRJDB4941_P_NODE_26787_length_193_cov_4.333333_g26019_i0 PRJDB4941 26787 193 4.333333 8.36333269 root 1 Root_unresolved Root_unresolved 109 1.99e-28   NR MCI0560693.1 1971748 g26019 i0 79.7 2.75129533678756 59 12 91.7 0 2 178 107 165 MCI0560693.1 DinB family protein [Nitrososphaera sp.] diamond 531 109 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29584143 29584143 PRJDB4941_P_NODE_39590_length_163_cov_0.912281_g38822_i0 PRJDB4941 39590 163 0.912281 1.48701803 Nitrososphaera 497726 Archaea Archaea 89.7 1.78e-21   NR MCY1154161.1 1971748 g38822 i0 100 3.1840490797546 42 0 77.3 0 127 2 1 42 MCY1154161.1 putative oxidoreductase domain protein [Nitrososphaera sp.] diamond 519 89.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29937834 29937834 PRJDB4941_P_NODE_28951_length_185_cov_2.455882_g28183_i0 PRJDB4941 28951 185 2.455882 4.5433817 Natronococcus pandeyae 2055836 Archaea Archaea 80.5 6.92e-18   NR WP_148860277.1 2055836 g28183 i0 58.3 1.92972972972973 60 25 97.3 0 1 180 31 90 WP_148860277.1 PqqD family protein [Natronococcus pandeyae] diamond 357 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus pandeyae
29937842 29937842 PRJDB4941_P_NODE_37751_length_165_cov_0.896552_g36983_i0 PRJDB4941 37751 165 0.896552 1.4793108 Methanoculleus sp. 90427 Archaea Archaea 42.4 0.00897   NR WP_292561050.1 90427 g36983 i0 40 0.818181818181818 45 27 81.8 0 2 136 48 92 WP_292561050.1 hypothetical protein [Methanoculleus sp.] diamond 135 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
30317395 30317395 PRJDB4941_P_NODE_23772_length_207_cov_1.278481_g23004_i0 PRJDB4941 23772 207 1.278481 2.64645567 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 66.2 6.42e-12   NR TMI21981.1 2026714 g23004 i0 96.8 2.69565217391304 31 1 44.9 0 1 93 92 122 TMI21981.1 MAG: tRNA-binding protein [Candidatus Bathyarchaeota archaeon] diamond 558 66.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30942983 30942983 PRJDB4941_P_NODE_2694_length_988_cov_5.815761_g2054_i0 PRJDB4941 2694 988 5.815761 57.45971868 Stenosarchaea group 2290931 Archaea Archaea 186 2.94e-49   NR WP_367358456.1 90426 g2054 i0 47.2 3.23076923076923 178 93 53.7 1 980 450 600 777 WP_367358456.1 transglutaminase domain-containing protein [Methanothrix sp.] diamond 3192 187 0.994652406417112 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
31486430 31486430 PRJDB4941_P_NODE_34996_length_168_cov_0.873950_g34228_i0 PRJDB4941 34996 168 0.87395 1.468236 Nanobdellota archaeon 2026764 Archaea Archaea 55.5 2.19e-7   NR MEK6832533.1 2026764 g34228 i0 59.6 0.839285714285714 47 19 83.9 0 166 26 122 168 MEK6832533.1 macro domain-containing protein [Nanoarchaeota archaeon] diamond 141 55.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31581250 31581250 PRJDB4941_P_NODE_40976_length_162_cov_0.920354_g40208_i0 PRJDB4941 40976 162 0.920354 1.49097348 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 51.6 5.9e-6   NR MFA6074075.1 2026803 g40208 i0 62.9 0.648148148148148 35 13 64.8 0 5 109 108 142 MFA6074075.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 105 51.6 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31960633 31960633 PRJDB4941_P_NODE_17778_length_246_cov_1.055838_g17010_i0 PRJDB4941 17778 246 1.055838 2.59736148 archaeon 1906665 Archaea Archaea 46.2 4.1e-4   NR RYH00022.1 1906665 g17010 i0 74.4 0.524390243902439 43 11 52.4 0 246 118 56 98 RYH00022.1 MAG: hypothetical protein EON65_49750 [archaeon] diamond 129 46.2 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;