RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJDB4941" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB4941 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10016 10016 PRJDB4941_P_NODE_10521_length_347_cov_1.046980_g9753_i0 PRJDB4941 10521 347 1.04698 3.6330206 Metazoa 33208 Platyhelminthes Platyhelminthes 171 3.75e-51   NR VUZ40767.1 6216 g9753 i0 72.2 16.9020172910663 115 32 99.4 0 346 2 87 201 VUZ40767.1 unnamed protein product [Hymenolepis diminuta] diamond 5865 172 0.994186046511628 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
20410874 20410874 PRJDB4941_P_NODE_21977_length_216_cov_2.299401_g21209_i0 PRJDB4941 21977 216 2.299401 4.96670616 Metazoa 33208 Platyhelminthes Platyhelminthes 147 9.38e-41   NR CAH8528140.1 6188 g21209 i0 90.3 8.97222222222222 72 7 100 0 1 216 229 300 CAH8528140.1 unnamed protein product [Schistosoma rodhaini] diamond 1938 148 0.993243243243243 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma rodhaini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;